KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_01648
Entry
SOMG_01648        CDS       T09274                                 
Symbol
rdh54
Name
(RefSeq) ATP-dependent DNA translocase Rdh54
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:som00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SOMG_01648 (rdh54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:som03400]
    SOMG_01648 (rdh54)
DNA repair and recombination proteins [BR:som03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     SOMG_01648 (rdh54)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ZGRF1-like_N
Other DBs
NCBI-GeneID: 80875130
NCBI-ProteinID: XP_056035012
UniProt: A0AAE9W6C6
LinkDB
Position
1:complement(join(3602504..3602644,3602683..3602940,3602994..3603063,3603108..3603195,3603236..3603316,3603357..3603603,3603642..3603817,3603854..3603926,3603968..3604125,3604165..3604263,3604306..3604369,3604422..3604553,3604601..3604674,3604719..3604909,3604953..3605185,3605258..3605333,3605381..3605479,3605519..3605673))
AA seq 804 aa
MKRKGTFQSPLVEKDINTVKINSVQTTDSSNSKTENESNEATKDPIYCTILWRKITMKKH
KTWEGDGYLVREGSNYTLYNADWSKIGSSAIRDFSFDEGDMFRVGGKEITVEKMMSREDF
NNGCLSNHQLNDVHLPDTYMSRKKVSFQSPVSQTSKLPRKPRALQQPRHDPSAAGSLVMQ
RPILWNDEEHVDVVVDAFLSKRLQSHQREGICFLYNSLTGISNKYGRCAILADEMGLGKT
LQTITVIWTLLKQNYQASQNTTIKNAMVVTPVTLLQNWHDEFYKWLGRERIHVCIAKSQA
DFEEFFRNRNYSILIIGYEMACCCLRKATLPGKIDLLVCDEAHRLKSMQSQAWIVLHKLK
IERKLLLTGTPMQNDLMEFYSMVNFLVPGLLGSVSSFKNQFEKPIIRSRVMFATERDQEL
GNARLNRLLEYTKDFILRRKTSVLAKHLPPRHDIAMFISPTTNQKQSYQEALKNYKNYSQ
EEKKGKHLVTLSLLSQICNSSLLINKLHSEHVDFGDLLNSSGKLKVVKSLLELFSTQKAK
TVIVSQYTETLKLLQRILSELKFPYLTLLGSTPHSERGNLVDKFNKSSFHETAVLLLSSK
AGGCGLNLTGASRLVLYEPSWNPAQDLQALSRIYRTGQRNSTGIYILLSAGMLDERIYIR
QNTKQGLSDSFLDSDESQRQNCFASDDLRELFTYDDNEACLINQLLHKSSLICQERSSLQ
SENSDDNYSERTHNTVSLSEDNTSSTWKKASEYQVPQYELISIANAFRDWNWVFQISEIY
ESGVSRLIPQDEKFINCFMYKAYS
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgaagcgaaaaggaacctttcaatcacctttagttgaaaaagacataaacacggttaaa
atcaattcagttcaaaccactgattcatcaaatagtaaaacggaaaatgaatcaaatgag
gctacaaaagacccaatctactgcaccattctctggcgaaaaataactatgaaaaaacat
aaaacttgggaaggagatggctatttggttcgtgaaggaagtaattatactctttataat
gcggattggtcaaaaattggaagtagcgctattcgtgacttttcgtttgatgaaggcgat
atgtttcgtgtggggggaaaagagataactgtcgaaaagatgatgtctagggaagatttc
aataacggatgtctatctaatcaccaattgaatgatgtgcatctgccagatacttacatg
tcgcgaaagaaggtctcctttcaaagtccagttagtcagacatcgaaattgccgcgcaag
ccgcgagccttacaacagccaagacatgatccaagcgctgctggatctttagtgatgcaa
agaccgatcctatggaatgacgaggaacacgtcgatgtcgtcgtggatgcgtttctgagc
aagcgtttacaatcgcaccaacgcgaaggaatttgtttcctctacaatagcttaacagga
attagtaacaaatacggccgttgcgctatattagcagatgaaatgggactgggtaaaacg
ttacaaacaataacagttatctggacattattgaaacaaaactatcaggcaagccaaaat
acaacgattaagaatgctatggttgtgactccagtcactcttttacagaattggcatgat
gagttttataagtggctcggccgtgaacgcatacatgtgtgtatagctaaaagtcaagca
gactttgaagagttttttcgcaatcgaaattattctatattgattataggttatgaaatg
gcttgctgctgtcttcgcaaagcgactctccccggaaaaattgacttgctagtttgtgac
gaagcccatcgattgaaatccatgcaaagtcaagcttggattgtcctgcataaactaaaa
atcgaaagaaaactgttattgactggaactccaatgcaaaatgatttgatggagttttac
tcaatggtcaattttcttgttcctggattgctaggaagcgtttcatctttcaaaaatcag
ttcgaaaaacctataattagaagtagagtcatgtttgcaaccgaaagagatcaagaattg
ggaaatgcaaggttaaataggttactggaatataccaaagatttcatccttcgaagaaaa
acgagtgtgcttgccaaacatcttccccctagacatgacattgcgatgttcattagccct
actacaaatcaaaaacaaagctaccaagaagccctgaaaaactataagaactatagtcaa
gaggaaaagaaaggaaaacatttggttacattatcacttttaagccaaatctgtaacagc
tctcttttaattaataagttacattcggagcatgtagattttggagatttattaaattcg
tctgggaaattaaaggtcgtaaaatctttgttggaactattttcgacacagaaggctaaa
accgtcattgtttcacagtatactgaaactttaaaacttttacaaagaatactatcggag
ttaaaattcccatatttgacattacttggaagtacgccacattcagaacggggtaacctt
gttgacaaattcaataaatcgagctttcatgagacggctgttcttctactatctagtaaa
gcaggtggatgtggacttaatcttacaggagcaagtagacttgtcctttatgaacccagt
tggaacccagcgcaagatttgcaggctctctcccgaatataccggaccggtcagagaaat
tctaccggaatttacatattgctaagcgctggtatgctcgatgaacgcatatatatccga
cagaacacgaaacaaggcttatcggattcattccttgattctgatgaaagccaaagacaa
aactgttttgcttcggatgatttgagggaactatttacatatgatgataatgaggcttgt
ttgataaaccagttactgcataaatcaagtcttatatgccaagaaagaagttctttacag
tctgagaatagtgatgataattattctgaacgtactcataacacagtgtcgttatcggag
gacaatactagtagcacgtggaagaaagcatcagaataccaggtgccacaatatgagtta
atttccatagccaatgcattccgtgactggaactgggtttttcaaatttcggaaatttac
gaatctggggtaagtcgtctcattccgcaagatgaaaaattcataaattgcttcatgtac
aaagcctactcttga

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