Schizosaccharomyces osmophilus (fission yeast): SOMG_01678
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Entry
SOMG_01678 CDS
T09274
Symbol
mot2
Name
(RefSeq) CCR4-Not complex ubiquitin-protein ligase E3 subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_01678 (mot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
som03000
]
SOMG_01678 (mot2)
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_01678 (mot2)
04121 Ubiquitin system [BR:
som04121
]
SOMG_01678 (mot2)
Enzymes [BR:
som01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SOMG_01678 (mot2)
Transcription factors [BR:
som03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
SOMG_01678 (mot2)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SOMG_01678 (mot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SOMG_01678 (mot2)
Ubiquitin system [BR:
som04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
SOMG_01678 (mot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-UDP
Rtf2
Prok-RING_4
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
80875160
NCBI-ProteinID:
XP_056035280
UniProt:
A0AAE9W906
LinkDB
All DBs
Position
1:complement(join(3677787..3678966,3679055..3679234,3679295..3679347))
Genome browser
AA seq
470 aa
AA seq
DB search
MLKSQDSYSSEEEDDMLCPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPAC
RRLYTEENVQWRPVTAEEWKMDLHRKNERKKREKERKEVEASNRKHLANIRVVQKNLAYV
NGLSPKIANEDNIHILKGLDYFGQYGKIIKIAINKKAAANSANGHVGVYITYQRKEDAAR
AIAAIDGSISDGRHLRASYGTTKYCTSYLRNQQCPNPSCMYLHEPGDEVDSYTKEDLASL
QHSRNLPGKVNGIATANHSPSPSLHFKTPLLPINKPLVDGGPNASDEHHHSGQPSVPHPS
SNVAAPYSSAAAANVTPGHTTTILHHEESSALPPTASWAKLSPTVLQERLRAAVNQQPLD
PLKSPSLSSHLPTVQQLRSVKLPSQKENRARWLDVAIRDLATPFSQTTFNTNGLGFSDDD
LEKIKSFPPLFVFNARSVINKQLGQDLQTLNENTAQRENELAQVMPPPGF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtcgcaagattcgtattcttctgaagaagaagatgatatgttgtgtcccttg
tgcatggaagagattgacatatccgacaagaactttaagccatgccaatgtggttatcga
gtttgcagattttgctggcatcatattaaggaagacttgaatggccgttgtcctgcctgc
agacgtttatatactgaagaaaacgtacaatggcgccccgtgacagcagaagagtggaaa
atggatttacatcgcaaaaacgaaagaaagaagcgtgagaaggaaaggaaagaagtggag
gcttcgaatagaaagcatttagcaaacattcgtgttgtccaaaagaatttggcctacgta
aatggcctgtctcctaagattgctaatgaagacaacatccatatccttaaaggtcttgat
tattttggtcagtacggaaaaataataaaaattgctataaataaaaaagcagccgcgaat
tctgcaaatggccacgtcggggtttacattacttatcaaagaaaggaggacgctgcgcga
gccattgcagccatcgacggtagtataagtgatggaaggcatttgcgtgcttcctatgga
acaaccaaatactgcacatcgtacttgaggaatcaacaatgcccgaatccgtcttgcatg
tatttgcacgagcctggtgatgaagtggatagctatacaaaagaagaccttgcttcgttg
cagcacagccgtaacttaccaggcaaagtgaacgggattgcgaccgccaatcactctcct
tctccttccttacactttaaaactcctttgttgccgattaataaaccactggtggacggc
ggccctaatgcctctgatgaacatcaccattcaggacaaccttcggtcccacatccttct
tccaatgtcgccgcaccttactcgtcggctgctgctgcaaatgtaactcctggacataca
actaccatccttcaccatgaagaatcttctgccctgccacccactgcttcttgggcgaag
ttatctcctacagttttacaagaacgacttcgtgctgcagtaaaccaacagcctttagat
cccttgaagtcaccatctctttcttctcacctaccgaccgtgcaacaattgcgttccgta
aagttgccctctcaaaaggaaaatcgtgccaggtggttagatgttgccattcgtgactta
gccacgccttttagtcagactacttttaatacgaacggtctcggatttagtgacgatgac
cttgagaaaattaaatcctttccgccgttatttgtgtttaatgctcgttctgttataaac
aagcaactgggacaagaccttcaaacattgaatgaaaatacagctcagagagaaaatgag
ctggctcaagtaatgcctccgcctggattctaa
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