Schizosaccharomyces osmophilus (fission yeast): SOMG_01692
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Entry
SOMG_01692 CDS
T09274
Symbol
rqh1
Name
(RefSeq) RecQ type DNA helicase Rqh1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03440
Homologous recombination
som03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SOMG_01692 (rqh1)
03460 Fanconi anemia pathway
SOMG_01692 (rqh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
som03032
]
SOMG_01692 (rqh1)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_01692 (rqh1)
Enzymes [BR:
som01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SOMG_01692 (rqh1)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
SOMG_01692 (rqh1)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
SOMG_01692 (rqh1)
Bloom's syndrome complex (BTR)
SOMG_01692 (rqh1)
FA (Fanconi anemia) pathway
SOMG_01692 (rqh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
80875174
NCBI-ProteinID:
XP_056036155
UniProt:
A0AAF0AUS6
LinkDB
All DBs
Position
1:3712514..3716389
Genome browser
AA seq
1291 aa
AA seq
DB search
MVVTKTNLNQHLDWFFRNGPQKLEYNKQPSVSLNFDNVSVDWSQKATLAPIKSVSPPKSN
VLDMFDEQQAIDLTDDFPKSMVLKRQSSSGDSDKYNSKRARSTKAVDSEEEFDDVDEEFL
RAAEMEAFQKQPSYAPAFVEHSSVPESVLNPIPHIDNQQYSDEFLNGKGSFCTPDDQKNS
NTHAATPVRQSSIPENHRSLTATPNSSSISLDFCSWPRDNLQHYLEILREEKSELSDRII
EMMENDPTSMRFKEWIPKRDVLSRKISLVHDAISNSEYPLQPSNLTTPSREQEREHEPTF
PSTFVPESVMKQKELPQAPPFNSTFNNEKVAATPTVSNASGNFVEQPYEKDISSTDIDSF
EFNDADITFPATDPIQDVPSSPNEALLIDSDNNGYANDKQNTSPNEAQHENIPLREIQNG
RLNINASQSRNEDMDRSHLVQLPPKTDPALNHRWSSELLHVLKHTFNLKGFRRNQLDAIN
GTLSGRDVFVLMPTGGGKSLCYQLPAVLEGGVTRGVTLVVSPLLSLMQDQLEHLRKINIP
SLPLSGEQPVDERRKVISFLMAEKVMVKLLYVTPEGLASNGAITRVLKNLYDRKLLARIV
IDEAHCVSHWGHDFRPDYKQLGVLRDSYRGVPLMALTATANEVVKKDIINTLRMDRCLEL
KSSFNRPNLFYEIRPKKDLYTELYRFLSNGHMHESGIIYCLSRTSCEQVADKLRKDYGLK
AWHYHAGIDKNERQRIQSEWQAGNYNIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQ
ETGRAGRDGKPAHCIMFYSYKDHVTFQRLIMSGDGDAETKDRQRHMLRQVIQFCENKSDC
RRKQILAYFGESFDRAQCSRGCDICCEEATYVKRDMTDIAAKAIKLIRSLSGKTTLLQLI
DVFRGSKGAKIIENGWDRLEGAGDGKSLNRGDSERLFHQLVAEGIFVEKVEANRRGFVSA
YVLPGKQTLLNAVIAGKHRVILEIKQESSNSGNESRGLTRSNTLPNMTRNYSSTLRTNSS
TSNHDQFPGNDDIYDSQLAPNNVGREIVTGRKINSDSLSGNSFMSEYEMDIMNRCFAELK
ILRSNLMALNDSRVGSYFTDAILSSMAQKLPRNTTELKEIHGVSGERAERVGPQFLQIIQ
KYIDEKDQNLAGTELDPTVESIDVDEFDNIDVLDFQPEEDGNDFDENGSDYQPSSPLDEA
SVTQRNDILNFMCSQSVSQHEPRPTSQSTTASNTSTYRRGGSRGGRSARGGRGRRAMPQR
RKRPANSQSRPRRASNSSSSFIRPMVRQNYS
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggttgtaaccaaaacaaacctgaatcaacatcttgattggttttttcgtaatggccct
caaaaattagaatacaacaagcaaccttctgtctcacttaattttgacaatgtttcagtc
gactggtcgcagaaagctactttggcacccataaagtcagtaagtcctccaaagtcaaac
gtactggacatgtttgatgaacagcaagccattgatttgacagatgacttcccaaaatcc
atggtacttaaaagacagtcatcatctggtgattctgataagtataattccaagcgagca
aggagtactaaagcagtcgacagtgaagaagaatttgacgatgttgacgaggagtttctt
cgagctgctgaaatggaggcttttcaaaaacaaccttcctatgctccagccttcgtggaa
cactcatctgtacctgaatccgtgttgaatcccatacctcatattgataatcaacaatac
agcgatgaattcctgaacggaaaaggctcgttttgtacccctgatgatcaaaaaaattcc
aatacgcatgctgcaactcctgttcgtcagtctagcataccagaaaatcaccgttcatta
actgctacacccaattcatcctccatctctttagacttttgttcttggcctcgggataat
ttgcaacattacttagagattctgagagaggagaaaagtgaactaagcgatcgaatcatc
gaaatgatggagaatgatccaacctctatgcgattcaaagaatggattcccaaacgggat
gttttgagtcgtaaaatttctcttgtccatgatgctatttcaaactcggaataccctttg
caaccttctaatcttactaccccttcaagggagcaggaaagggaacatgaacctactttt
ccttcgacgtttgtacctgaatcagtaatgaagcaaaaagagcttccacaagctccgccg
ttcaacagtacctttaataatgaaaaggttgctgctacccctactgtttcaaatgcttcg
ggaaactttgtggagcagccttatgaaaaggatatatcttctacggatatcgacagtttc
gaatttaatgatgctgacatcacttttccagcaactgatcccatccaggatgttccgagc
tctcccaacgaagccttgttaatagatagcgacaacaatggttatgccaatgacaaacag
aacactagcccgaacgaagcacagcacgaaaatattcccctaagagagattcagaatggc
aggctaaatataaatgctagtcaatcaagaaatgaagatatggacagaagccatctagtt
caactccccccgaaaacggatcctgctttgaaccataggtggtcatctgagcttcttcat
gtgttgaagcacacgtttaatctcaaagggtttcggagaaatcaactggatgctattaac
gggacgctttctggaagggacgtctttgttctaatgcccacaggtggtggtaaatcattg
tgttaccaactaccagcggtacttgaaggtggagtaacccgaggtgtcactctagttgtt
tcaccacttctctctttgatgcaggatcaacttgaacatttgaggaaaattaatattcca
tccttgcctcttagtggtgaacagcctgtcgatgagcgtcgaaaagttatatctttcctt
atggcagaaaaagtaatggtaaaattactttatgttacacccgagggtttggcaagcaat
ggtgcgataacaagggttttgaaaaatctgtatgatcgaaaattgcttgcccgcatagtg
atcgatgaagcacattgtgtaagccattggggtcacgattttcgacctgactacaagcag
ttaggggtgttgagagattcttatcgaggtgtgcctctgatggctttaacagctactgcc
aatgaagttgtaaaaaaggacatcataaacacccttagaatggatcgttgcttggaactc
aaatctagctttaatcgccctaatttattttatgagatacgaccaaagaaggatctttat
acagaattatatcggtttctcagtaatggacacatgcatgaatcgggtattatatattgc
ctttcaaggactagttgcgagcaagttgcggataagttgagaaaagattatggattaaaa
gcttggcattatcatgctggaattgacaaaaacgaaaggcaaagaattcaaagcgaatgg
caagctggaaactataatattattgtcgctactatcgcctttggtatgggtgttgataaa
ggtgatgtacgatttgtcattcatcacagttttccaaaatctcttgaaggctattatcaa
gagacaggtcgcgctggcagagatggaaagccagcgcattgtataatgttctacagttac
aaagaccatgtaaccttccaacgattaattatgagcggtgatggtgatgctgaaacgaaa
gatcgccagcgacatatgcttcggcaagttatacaattttgtgaaaataaatctgattgt
agaagaaaacagatattagcatactttggtgaaagttttgaccgggcacaatgttctcga
ggttgtgatatatgttgcgaagaagcgacatatgtaaaaagggatatgaccgatattgca
gccaaagctattaaattaatacgatccctatcaggaaaaacaactcttctacagttaata
gatgtatttcgtggtagtaaaggagcgaaaattattgaaaacggctgggatagactagaa
ggagccggcgacggaaagtcattgaacagaggagattcagaaagactatttcaccaattg
gttgccgaaggaatatttgttgagaaagtggaagctaatcgtagagggttcgtatcggct
tatgtattacccggtaagcaaacactgttaaatgcggtaatagctgggaaacaccgagtt
atacttgagataaagcaggaatcgtcaaattctggaaatgaaagcaggggcttgacacgc
agcaatacgctgccgaatatgacaagaaattattcttcaactctaaggacgaatagttcg
actagtaatcacgatcagtttccaggaaatgatgacatttacgattcacaattggctccg
aacaatgtaggacgtgaaatagtaacgggtcgcaaaatcaattcagatagtttatctggt
aacagttttatgtctgaatatgaaatggacattatgaatcgttgtttcgctgaactaaag
atccttcgaagtaatctaatggcgttgaatgattctagagttggttcgtactttacagat
gcgattttatctagcatggctcaaaaacttcctaggaatactacggaattaaaagagata
catggggtcagtggtgaacgcgcagaaagagttgggccacaatttcttcagattattcaa
aagtatattgatgaaaaagatcaaaatttggctggaaccgaattggatcctacggttgag
agtattgatgttgatgaatttgataatatcgatgtactcgattttcagcctgaagaagat
ggtaatgactttgatgaaaatggtagcgactatcagccttcaagtcctctggatgaagca
tcggttactcaaagaaatgatatcttaaattttatgtgtagtcagtctgtttctcaacat
gaacctcgtcctacttctcagtcaacgactgcttcgaatacaagtacgtataggagaggc
ggttctcgaggaggtcgttctgcaagggggggccgtggacgaagagcaatgcctcagcgt
cgcaaaagaccagcgaattctcagtcccgtcctcgaagagcatcaaactcgtccagttca
tttattcggccaatggttcgacaaaactacagctaa
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