Schizosaccharomyces osmophilus (fission yeast): SOMG_01700
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Entry
SOMG_01700 CDS
T09274
Symbol
rpb2
Name
(RefSeq) RNA polymerase II complex subunit Rpb2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03020
RNA polymerase
som03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOMG_01700 (rpb2)
09124 Replication and repair
03420 Nucleotide excision repair
SOMG_01700 (rpb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_01700 (rpb2)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_01700 (rpb2)
Enzymes [BR:
som01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SOMG_01700 (rpb2)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SOMG_01700 (rpb2)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SOMG_01700 (rpb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
DUF5817
RNA_pol_Rpb2_45
MRNIP
DUF7129
Motif
Other DBs
NCBI-GeneID:
80875182
NCBI-ProteinID:
XP_056036616
LinkDB
All DBs
Position
1:join(3731470..3731485,3731524..3735143)
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AA seq
1211 aa
AA seq
DB search
MSYEDYQYNETLTQEDCWTVISSFFEETSLARQQLFSFDEFVQNTMQEIVDDDSTLTLDQ
YAQHTGAQGDVTRRYEINFGQIYLSRPTMTEADGSTTTMFPQEARLRNLTYSSPLYVDMR
KKVMVAADSNVPIGEEEWLVEEEDEDPSKVFIGKIPIMLRSTFCILNGVSDAELYDLNEC
PYDQGGYFIINGSEKVIIAQERSAANIVQVFRKAAPSPIALVAEIRSAVERGSRLISSMQ
IKLMARNAENSGQTIRATLPYIRSDIPIVIVFRALGVVPDRDILEHICYDPNDLQMLEMM
KPCIEEAFVIQDKDIALDFIGKRGSTTGVTREKRLRYAHDILQKELLPHITTMEGFETRK
AFFLGYMINRMLLCALERREPDDRDHFGRKRLDLAGPLLASLFRMLFRKMTRDVYKYMQK
CVETNREFNLTLAVKSNTITNGLRYSLATGNWGDQKRSMMNRVGVSQVLNRYTFASTLSH
LRRTNTPIGRDGKLAKPRQLHNTHWGMVCPAETPEGQACGLVKNLALMSYVSVGSPAAPI
IEFLEEWGLESLEDYNPSASPNATKVFVNGVWLGVHRDPAHLTDTLRSLRRRLDISAEVS
IVRDIREKELRLFTDAGRICRPLFIVDNDPNSETRGELSIRKEHVQQLIEDRDRFDIDPE
QKFGWTALVSSGLIEYLDAEEEETVMIAMTPEDLEASRQMNAGYEVKEELDPAQRVKPAP
NPHVHTYTHCEIHPAMILGILASIIPFPDHNQSPRNTYQSAMGKQAMGVYLTNYQVRMDT
MANILYYPQKPLATTRSMEYLKFRELPAGQNAIVAILCYSGYNQEDSIIMNQASIDRGLF
RSIFYRTYTDQEKKIGMTVMEEFERPARSTTLRMKHGTYDKLEDDGLIAPGTRVSGDDII
IGKTAPIPVDNEEMGQRTQLHAKRDVSTPLRSTESGIVDQVLVTTNQEGLKFVKVRMRST
RVPQIGDKFASRHGQKGTIGMTYRHEDMPFSAQGVVPDVIINPHAIPSRMTVAHLIECQL
SKVSALSGFEGDATPFTDVTVEAVSKLLRSHGFQSRGFEVMYHGHTGRKLVSQVFLGPTY
YQRLKHLVDDKIHARARGPVQILTRQPVEGRSRDGGLRFGEMERDCQISHGCSSVMRERL
FDCSDAYRVVACDLCGLVAIASYKKNSYECRSCQNRTRFSQIYLPYAAKLLFQELMSMNI
APRLFTKNHKI
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgaggattatcaatacaatgagacattgactcaagaagattgttggacggtg
atctcgtcgttttttgaggagacgtcgctggctcgtcagcagttgttctctttcgatgaa
tttgtccaaaatactatgcaagagattgtcgacgatgactctacattgactttggatcaa
tatgctcagcatacaggtgctcaaggcgatgttactcgtcgttacgaaattaattttgga
caaatttatctctcgagacctactatgacagaagccgatggcagtacaactactatgttc
ccacaagaagctcgacttcgtaatcttacttactcttctcctctctacgtggatatgcgt
aaaaaggtcatggtggctgctgactcaaacgtccctattggtgaggaagaatggctcgtt
gaagaagaagatgaagacccttcaaaggttttcattggaaaaattcctattatgttacgc
tctaccttttgtattttgaatggtgttagcgatgccgagctttatgatcttaacgaatgc
ccatacgatcagggtgggtatttcattattaatggttcagagaaggttattattgcacag
gaacggtctgctgctaatatcgttcaagtttttcgtaaagctgctcctagtccaattgct
cttgttgccgaaatccggtctgctgttgaacggggcagtcgattaatttcttctatgcaa
attaagttaatggctcgaaatgcggaaaattccggtcaaactatccgagctactttaccg
tatattcgtagtgacattcctatcgtcattgtcttccgtgcattaggtgtcgtgccagac
cgtgatatcttagaacacatctgttatgatccaaatgatttgcaaatgctggaaatgatg
aaaccatgcattgaagaggcttttgttattcaagacaaagatatcgcattagattttatc
ggtaaacgtggtagcacaactggtgttactcgagaaaaacgtcttcgttatgctcatgat
attctgcagaaggaattattaccccatattactaccatggaaggttttgaaactagaaaa
gcattctttttgggttatatgattaatcgtatgcttctttgtgcgctggaacgccgtgag
cctgacgatcgtgatcattttggaagaaagcgtttagatcttgctggtcctttgctagca
tctttgtttagaatgctctttagaaaaatgactcgtgatgtttataagtacatgcagaaa
tgtgtcgaaaccaaccgcgagtttaatcttactttggctgtgaaatccaatacaataact
aacggtttacgttattctttagcaaccggtaactggggtgatcaaaagagaagcatgatg
aacagagtcggtgtttcacaagtccttaatagatatacatttgcctctaccctatctcat
ttgcgtcgaaccaacactcctattgggagagatggtaaacttgcaaaaccccgtcaactt
cacaatacccattggggtatggtttgtccagctgaaacaccagagggacaagcatgcggc
ttggtaaagaatttggcacttatgagttacgtttcagtcggttcaccggctgcacctatc
attgaatttttggaagaatggggtttggaaagcttagaagactataatccttcggcatct
ccgaatgctactaaagtgtttgttaacggtgtttggttgggtgtgcatcgtgaccctgct
cacttgacagacactttgagaagtttgcgtcggcgtctagatatttcagcggaagttagc
attgttcgagatattagggaaaaggagcttcggctgtttactgatgctggccgtatttgt
cgtccattatttattgtcgataacgatcctaatagcgaaaccagaggagaactctctatc
cgtaaagaacacgttcagcaattaattgaggatcgtgaccgtttcgatattgatccagaa
caaaaatttggctggactgctttggtttcaagtggattgattgaatatttggatgccgaa
gaagaggaaacagtaatgattgctatgactccggaagaccttgaagcttctcgccaaatg
aatgcaggctacgaagtaaaagaagaattagatccggctcaaagagtaaaacctgctcct
aatccccacgtgcatacttatacccattgcgaaattcatccggcgatgatccttggtatt
ctagcaagcatcattcctttcccagaccacaatcagtcgcctcgtaatacttaccagtca
gcaatgggtaagcaagctatgggtgtttacttgaccaattaccaagttagaatggataca
atggcaaacattttgtattatcctcaaaagccattggcaacaactcgatctatggaatat
cttaaattccgagagctacctgctggtcagaatgctatcgttgccattttgtgttacagt
ggttataatcaagaagattctatcattatgaaccaagctagtattgatcgtggtttattc
cgcagtatcttttaccgaacctatacagatcaagaaaagaaaattggtatgactgtcatg
gaagagtttgaacgtcccgctagatctaccactcttcgaatgaagcatggtacttatgac
aaacttgaagatgacggtctaatcgctcctggaactcgtgtatcaggagatgatataatt
atcggaaaaacagcaccaatacccgtggacaatgaagaaatggggcaacgaactcagttg
catgctaaacgtgatgtttcaactccacttcgtagtactgaaagtggtattgtagatcaa
gtattggtaactacaaatcaagaaggtctcaaattcgtcaaggtcagaatgcgcagtacc
agagttcctcaaattggtgataagtttgcttctcgacacggtcagaaaggtacaattggt
atgacttatagacatgaagatatgcctttctcagcacaaggtgttgtgcctgatgtcatc
attaatcctcatgctattccatctcgaatgacggttgcacatttaatcgaatgtcaacta
agcaaagtatctgccttgtcaggttttgaaggtgatgctacaccttttactgatgttact
gtagaagcggtttcaaaacttctgcgttctcatggctttcagtctcgtggttttgaagtt
atgtatcatggccataccggaagaaagctagtctcgcaagtattcctcggcccaacgtat
taccaacgtttaaagcatttggtggatgataaaattcacgctcgtgctagaggaccagtg
cagattttaacccgacaaccagttgaaggacgttcccgagatggtggtttacgtttcggt
gaaatggaacgagattgtcaaatttcccatggatgcagtagtgttatgcgagagcgtttg
tttgactgttcagatgcttatagagtcgtggcctgcgatttatgtggcttggtagctatt
gcaagttataaaaagaactcttatgaatgccgttcttgtcaaaatcgcacgagatttagt
caaatctatcttccttatgccgctaagctacttttccaagaattgatgtctatgaatatt
gctcctcgcctatttactaaaaatcacaaaatttaa
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integrated database retrieval system
