Schizosaccharomyces osmophilus (fission yeast): SOMG_01728
Help
Entry
SOMG_01728 CDS
T09274
Symbol
spb1
Name
(RefSeq) rRNA methyltransferase Spb1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_01728 (spb1)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
SOMG_01728 (spb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
80875210
NCBI-ProteinID:
XP_056036981
UniProt:
A0AAF0AVR3
LinkDB
All DBs
Position
1:join(3802359..3802389,3802430..3802462,3802555..3804896)
Genome browser
AA seq
801 aa
AA seq
DB search
MGKIHKKSAKGRLDKWYKLAKEQGYRSRAAFKLVQLNQKFSFLEKAKVVIDLCAAPGGWL
QVASRACKPGSLLVGVDLAPIRAIPNCQTFVEDITSDKCRSQLRGVLKTWKADVVLHDGA
PNVGAAWLQDAYGQAELVLMSMKLACEFLVPGGTFVTKVFRSRDYNNLLWVFKQLFNKVD
ATKPPSSRNVSAEIFVVCRGYKAPQKLDPRFTDPRAVFEEVAEPTPNVEAKVFEPEKKKR
NREGYADNDYTLHKTVPASDFVSGNDPIQVLGTSAEIVFPEEDEDSQRLKNLEITDEDVL
IYCSDLQVLGKKDFRDLLKWRLRARSELGLGKRPENEEKTVVEEIPQVDEETQMDQELQH
LNEAERIKVKRERRRANKHKQREIIRMQMGMEAPMEIGMEQSEMGEDSMFGLSTAEKHGL
GKLTDASAPEIPATEEEDETLGESEEEYDSEDEQERLEAELDSMYSQYTVRKAESDVNYK
VKRSRGDANDEEWEGIQQPTSDSEEDESKTASEEGGERLLTSLDKNDSGKNGLSKKASLF
FDQDIFDGIGDDGDADKEIVTMNAAAKEERLAPTENEDESFDEEKRTRKDDIEMVPSISA
EEKEDDWDSDSDNEGENVDIVTAEAMTLAQEIASRRKTKSDLIDDGYNRWSFQPKDGLPD
WFIDEENHHNKPNKPITKDAVLALREKMKTINARPIKKILEAQGRKKMRTVRRMQNVSKK
AEGITESGEMTEGEKSKEISRLMSRAMKSKPKQKPALVVAKGANRGIQSRPKGVKGKYKM
VDSRMKKDLRAQKRLDKKKRK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaattcataaaaagtcggcgaagggacgtttggataagtggtataagcttgcc
aaagaacaggggtaccgctctcgtgctgcgttcaagttagtccaattgaaccagaagttt
agcttcttagaaaaggctaaagtggtcattgacctttgcgctgctcctggtggttggcta
caagtagcttctagagcatgcaagcctggttctttacttgtcggtgttgacttggctcct
atcagagctattccaaattgccaaacgttcgtagaagacattacttctgataaatgtcgc
tcacaattacgaggtgttttaaagacatggaaggcggatgtggttcttcacgacggtgct
ccaaatgttggtgctgcatggttacaagatgcttatggtcaagcagagttggtattgatg
tccatgaagcttgcctgcgaatttttggtccccggtggtacattcgtcactaaggttttc
cgttcccgtgactacaacaatcttttatgggtatttaagcaacttttcaacaaagttgat
gctacaaaacccccttcttcacgtaatgtgtctgcagaaattttcgttgtttgcagaggt
tataaggctccgcaaaagttggatccccgttttactgatccacgtgctgtgttcgaggaa
gttgcagagccaactccaaacgtagaggcgaaggtcttcgaacctgaaaagaaaaaaagg
aatcgtgagggttatgccgataatgactatactcttcacaaaactgtaccagcatcagat
ttcgtgtcaggaaatgatccaattcaggtcttgggtacttctgcggaaattgtctttccg
gaagaagatgaagattctcaacgcttaaaaaatctggaaataacggatgaagatgtgttg
atttactgctctgatttacaagttttaggcaagaaagacttccgtgatctactaaaatgg
cgacttagagctcgcagcgagttgggtctaggcaagcgccccgaaaacgaagaaaagact
gttgtagaagagattccccaagttgacgaagaaacgcaaatggatcaggaattacaacat
ttgaatgaagctgaacgcattaaagttaagcgcgagcgacgtagggctaataagcataaa
caaagagaaatcatcagaatgcagatggggatggaggcccctatggaaattggtatggag
caaagtgaaatgggagaagacagcatgttcggattgtctacagcagaaaaacacggcctt
ggtaaactaactgatgcttccgctccggaaattcctgctacggaagaagaagatgagact
ttaggggagagtgaagaagaatacgatagcgaggatgagcaggaacgcctcgaagctgag
ttggactctatgtattctcagtacaccgtaaggaaagcagaatcagacgttaattataaa
gttaaacgatccagaggtgatgctaatgatgaggagtgggaaggaatccagcaaccgact
agtgacagtgaagaagacgaatcgaaaactgcttcagaagaaggaggcgagcgtcttctt
acttctcttgacaaaaatgattcgggtaaaaatggtttgagtaagaaagcttctcttttc
tttgatcaagatattttcgatggtatcggtgacgatggcgatgctgataaggaaattgtc
accatgaatgctgctgctaaagaagaaagattagctccaacggaaaatgaagatgaaagc
tttgatgaagaaaaaaggactcgaaaggatgatattgaaatggttccttctatttctgcc
gaagaaaaggaggacgattgggattcagattctgacaatgaaggcgaaaacgttgacatt
gtaacagcggaagcaatgactttagcacaagaaattgcttctcgcagaaagacgaaatca
gatctcatcgatgatggatacaaccgttggtcattccagcctaaggatggtcttccagat
tggtttattgatgaagaaaatcaccacaacaagccaaataaacctattactaaagacgct
gttctggctttgcgcgagaagatgaagactattaatgctcgtcccatcaaaaagattctt
gaagcacaaggtcgtaaaaagatgcgtactgtcagacgtatgcagaatgtttctaagaag
gctgagggtattactgagagtggtgaaatgactgagggtgaaaaatctaaggagatttcc
cgcctcatgagccgtgcaatgaaatcgaagcccaaacaaaaaccggcactcgttgttgct
aaaggtgctaacagaggtatccaatctcgtccaaagggtgtcaaaggtaaatataaaatg
gtggattctcgtatgaagaaggatcttcgtgcgcaaaagcgtcttgataagaaaaaacgt
aaataa
DBGET
integrated database retrieval system
