Schizosaccharomyces osmophilus (fission yeast): SOMG_01788
Help
Entry
SOMG_01788 CDS
T09274
Symbol
trm402
Name
(RefSeq) tRNA (cytosine-5-)-methyltransferase
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
som03016
]
SOMG_01788 (trm402)
Enzymes [BR:
som01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
SOMG_01788 (trm402)
Transfer RNA biogenesis [BR:
som03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
SOMG_01788 (trm402)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
Spt46
DUF4080
LicD
Motif
Other DBs
NCBI-GeneID:
80875270
NCBI-ProteinID:
XP_056034866
UniProt:
A0AAF0ATP6
LinkDB
All DBs
Position
1:join(3926708..3926728,3926768..3926817,3926930..3928078,3928124..3928384,3928431..3928961,3929014..3929047)
Genome browser
AA seq
681 aa
AA seq
DB search
MGKKSNKPTQGKRAYNDKREIVLENEKFESYYRKQNIFGNNAESENEFQTLMEFLKKPLP
TTFRICGYLQHAFELKNHFEKHYIPQLQNVEFEGTAIPAPEIIPWYPNQLAYSIDAKKEI
IRKSPPFKRLQRFLVSENEAGNINRQEAVSMLPPLFLDLLPHHLVLDMCAAPGSKTAQLI
EAIYNQAHVKDAVKDSANLSSLQGLIIANDADPKRAQMLVHQINRLNSPNVLVVNHDAST
MPNVIIPSSSSDEANEKEILKYDRVLADVPCSGDGTFRKNISLWKDWSATSGLSLHPLQL
RILIRGLQLLKVGGYMVYSTCSMNPIENEAVVCAALKATGESVSLVDISEKLPELKRESG
LSNWKVMDDTLQEYSSPEDSHPENVTLASTMWPLSMDEMKKQHIERCARIYPQHQNTGGF
FIAMLKKESPLQAHRVDALKKQDERPELKRQKLDNEASVSTSAPQPVTKTGNNYFDEEPF
VYIKPDDESISSVSNFYGLDPKFPRDHFFVRNQSGTPTRSVYFACSLFKKIIENNINRVK
FVHGGVRFFVKQDISPLLKSNESLEVNKDICNFRIHSDGVNIISPYLDEKFFCDADLEDL
KILMKYDYPRLEQFPENGKLKVGSEKMVFGCNIVRAHAKTEDGSLTDMRILLPVWRSPNS
CNLMLARKEKQNLELELFGMD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaaagtaataagcctacgcaaggcaagcgtgcttataatgataaaagagag
atcgtgcttgaaaacgaaaagtttgagagctattaccgtaaacagaatatctttggtaac
aacgccgaatccgaaaatgaatttcaaacattgatggagtttcttaaaaaaccattacct
acaacttttcgaatttgcgggtatctgcaacatgcctttgaattaaaaaatcacttcgag
aaacactatattccccaactccagaatgtcgagtttgaagggacagcaattccagcacct
gaaattatcccttggtatccaaatcaactggcttatagcattgatgctaagaaagaaatt
attcgcaagagcccgccttttaagcgtcttcaacgcttccttgtgagcgaaaatgaagct
ggaaacattaatcgtcaagaggctgtcagtatgctacctcccttgtttttagacttgctt
ccacatcatttggtgttggatatgtgtgctgcaccaggatcaaaaactgctcaacttatc
gaagccatttataatcaagctcatgtgaaagacgccgtcaaagacagtgctaacctaagc
tctcttcaaggactcattatcgctaacgatgcagatccaaaacgtgctcaaatgcttgta
caccaaataaatcggttgaactcccctaatgtattggtagtaaatcatgatgcttcaact
atgccgaatgttatcattccttcttcttcttcagatgaagctaatgagaaagaaatttta
aagtatgaccgcgttttggctgatgtaccctgttctggagatggcacattccgtaaaaat
atttccttatggaaggactggagcgcaactagtggtttgagtctccatccacttcaatta
agaattcttatccgtggtctacaacttttaaaggttggtggttacatggtttattctact
tgctctatgaaccctattgaaaacgaagcagtagtatgtgctgctttaaaggctacgggt
gaatccgtatctctagtagacatctcagaaaagcttccagaattgaaacgcgaatccggt
ctatctaattggaaggtcatggatgacactcttcaagagtacagttctcctgaagattct
catccggaaaacgtcacccttgcctctactatgtggcctctgtcaatggatgaaatgaag
aaacaacacatagaacgatgtgcacgtatatatcctcagcatcaaaacactggaggtttc
ttcatcgctatgttgaagaaggaaagtcctttgcaggcgcatagagttgatgctttaaag
aaacaagatgaaaggccagaacttaaacgtcaaaaacttgataatgaagcatctgtgtcg
acttccgctccccagcccgttaccaaaactggtaataattactttgacgaagaaccgttt
gtttatattaaaccagatgacgaaagcatttcttctgtctcgaatttttatggtttagat
cctaaatttcctcgtgaccatttctttgttcgtaatcaaagtggcacacctacaaggtct
gtgtattttgcgtgctccctgttcaagaaaattatagagaacaacattaatcgtgtgaag
tttgtacacggcggagtccgcttttttgtcaaacaagatatcagtcctttgcttaaaagt
aatgagtcgttggaagtcaacaaggatatctgtaatttccggatccacagtgatggtgtt
aatatcattagcccatatttagacgaaaagttcttctgtgatgctgatcttgaagattta
aaaatactaatgaagtacgattatcctcgtttggaacagtttcccgaaaatggcaaactg
aaagtaggatccgaaaaaatggttttcgggtgtaacatagttcgcgctcatgccaaaact
gaggatggatcacttaccgatatgcgcattttactgcctgtttggcgaagcccaaatagt
tgcaacttaatgcttgccagaaaagaaaaacagaatttagagttggagttatttggaatg
gattaa
DBGET
integrated database retrieval system
