Schizosaccharomyces osmophilus (fission yeast): SOMG_01847
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Entry
SOMG_01847 CDS
T09274
Symbol
prp22
Name
(RefSeq) ATP-dependent RNA helicase Prp22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_01847 (prp22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
som03041
]
SOMG_01847 (prp22)
Enzymes [BR:
som01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SOMG_01847 (prp22)
Spliceosome [BR:
som03041
]
Complex C
Other components
Step II factors
SOMG_01847 (prp22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
S1
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
ABC_tran
SRP54
nSTAND3
AAA_30
EDC4_C
T2SSE
TsaE
Motif
Other DBs
NCBI-GeneID:
80875329
NCBI-ProteinID:
XP_056036556
UniProt:
A0AAE9WAD7
LinkDB
All DBs
Position
1:complement(join(4054573..4058015,4058081..4058153))
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AA seq
1171 aa
AA seq
DB search
MDDLEELEYLSLVSKVASEIKNHTGIDDKTLSEFVINLYEQSKTFDEFKENVQASGGDFA
ESFLQNVARLIRELHPKLKAKILGDQDSVGKNKTAVPNLTPESDNADRKRELFPGLSIPD
HRNLENSNQDSDLMNDTMNELDRLSSSSRSRRPDSTRDIFYRERSRSPPRSSRNGDRHPA
DRYVPTRSRDSSSTYRRQKTNAFNGFPQLNEIYPGIVSGIKEFGAFVTLDGFSQRTDGLV
HISNLMSGRRVEHPSEVVAYGQPVLVKVNRVDEASKRIGLSMKEVDQITGEDLKPKTEDN
VIYRGTGANSVGLNADEKNVQTTDFFDVGKNNGRKRLTSPEIWELQQLAASGAISSSSIP
GFQEELTTFNNPELKPEDDEDFEIELRDEEPRFLAGQTKLSLKLSPIKVVKAPDGSLSRA
AMQGQVLASDRREMRQKEARMQSEKELEKQDLSLVWNDTMARPEDKKFAQEIRSSATQQM
TTQMPNWRQQSVKGPDVSYGRKTTLSMKEQRENLPVFKLRKAFLEAVFKNQVLVLLGETG
SGKTTQITQYLAEGGYTDNRKIVGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFED
KTSRMTRIKYMTDGMLQRECLVDPLLRKYSVIILDEAHERTVSTDVLFGLLKHTVTRRSD
LKLIVTSATLDAERFSSYFHKCPIFTIPGRSYPVEVLYAKQPESDYLDAALLTIMQIHLT
EGPGDILVFLTGQEEIDTSCEILHERTKMLGDSVPDLVILPVYSALPSEVQSRIFEPAPP
GGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLVVTPISQAQARQRSGR
AGRTGPGKCYRLYTENAFQNEMLPSPIPEIQRQNLSYTILMLKAMGINDLLNFDFMDPPP
AQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEILTIIA
MLSAPNIWSRPREKQQEADKHRAQFSNPESDHLTLLNVYTAWKTNRCSDNWCYEHYIQAR
GLRRVEDVRKQLLSLMDRYHQPVISCGRNRELILRALCSGHFTNVAKRDSHEGCYRTTVE
NAQVYMHPSSVLFGKPAEWVIYHELIQTTKEYMHTVSTIHPRWLVEVAPTFFKFANPNQI
SKSKKGTKVVPLFNRFEKADEWRISKQKKGR
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttagaggaattggagtacttgtccctcgtttcaaaggtcgcctctgaaata
aaaaatcatactgggattgatgataaaactctatctgagtttgtaataaacttatatgaa
caatccaaaacttttgatgaattcaaggaaaatgttcaagcatcaggaggagattttgca
gagtcctttctacaaaatgtcgccagattaattcgcgaattacatccaaaattgaaagcg
aaaatcctaggtgatcaggattctgttggtaaaaacaaaaccgcggtgcctaatctaacg
cctgaaagcgataatgcggatcgaaagcgggagttgtttcctggtttaagcattcccgat
catagaaatctcgaaaattctaatcaagacagtgatttaatgaatgataccatgaatgag
ttagatcggttgtccagctcttcgcgttcaagaaggccggatagtactcgggatattttt
tacagagagaggtcgagaagtccccctcgttcttctcgtaatggtgatagacatcctgca
gaccggtatgtacctactcgttcgcgcgatagtagttctacttatcggcgtcaaaaaact
aatgcgtttaatgggtttccacaattaaatgaaatataccctggtattgtttctggtata
aaggaatttggtgcctttgtgacattggatggcttttcccaaagaacggatggtttggtc
catatatccaacctgatgagtggtcggcgtgttgagcatccctctgaagttgttgcatat
gggcaacctgttttggttaaggttaatcgagtagatgaagctagcaaaagaataggtctc
tcgatgaaagaggttgatcagattactggagaggacttgaagcccaaaacagaagacaat
gttatttatcgtggcaccggtgctaattctgttggtttgaacgcagatgaaaaaaatgtt
cagacaactgatttcttcgacgtcggtaaaaataatggaagaaagagactgacttctcct
gagatttgggaactgcaacagctggctgcttcaggagcaatttcatcatcaagtattcct
gggttccaagaggaactgactacatttaataaccctgaattgaagccagaagatgatgaa
gatttcgaaattgaattacgtgatgaagaacctaggttccttgctggtcaaacaaaactc
tcccttaagctttctcctataaaagttgtaaaagcacccgatgggtctttatctcgagct
gcaatgcaaggacaagtactagctagtgatcgtcgagaaatgcgtcaaaaagaagcacgt
atgcaaagcgaaaaagagctagaaaaacaggatctatcgttagtatggaatgatacaatg
gcccgaccagaagacaaaaaatttgctcaggagatacgcagttcagcaactcaacaaatg
actactcaaatgcccaattggcgacagcaatccgtaaagggtccagatgtatcgtacggg
aggaagacgactttaagcatgaaagagcagagagagaatctccctgtcttcaaacttcga
aaggcgtttttagaagctgttttcaaaaatcaagtccttgttctgttaggtgaaacgggt
tccggtaaaaccacgcaaattactcaatatttagccgaaggaggttatacggataataga
aaaatagtcggttgtactcagccaagacgtgtagctgctatgtcagttgcgaagcgcgtt
gctgaagaagttggatgccgggttggagaagaagtcggttataccattcgtttcgaagat
aagacaagtaggatgactcgaattaaatacatgacagatggtatgcttcagcgcgaatgc
ttggttgatccactcttaagaaaatattctgttatcattctcgatgaagcacatgaaaga
actgtatctactgacgttttgtttggcttactgaagcatacagtaacgaggagaagtgat
ttgaaattaattgttacgtctgccacgttagatgcagaacggttttcctcgtatttccat
aaatgccctatatttacaattcctggacgatcttatcctgttgaagtattatatgccaag
caaccagaaagtgactatcttgatgcagcattacttacgataatgcaaatacatttaact
gaaggtccaggtgacattttagtatttttgacaggacaagaggaaattgatacgagttgt
gaaattcttcatgaaaggacaaagatgctgggggattctgtacctgatttagtaattctg
ccagtatattccgcgctcccttcggaggtacaaagtcgtatttttgaacctgctccaccg
ggaggaagaaaggtagttattgctacaaatattgcagaaactagtttgacgattgatgga
atttactatgtagtcgatcctggttttgtgaagcagagttgttttgatcccaaattaggt
atggattctctggtcgttacgccgatttcacaagcacaagcaagacaaagaagtggacgt
gcaggccgtacagggccaggaaagtgctaccggttgtatacagaaaatgccttccagaat
gagatgttaccgagtccgattcctgagatccaacgtcaaaatctttcttataccatcctt
atgttgaaggctatgggaatcaatgatttgctgaactttgactttatggatccaccgcca
gcgcaaacgatgattgccgcattacaaaatctatatgcattatcggcactggacgacgaa
ggattgttaacgccattgggaaggaagatggcggactttcctatggagccacaattatca
aaggttttgattacgagtgttgaacttggatgttctgaagagattttgacgattatagcc
atgttgagtgctcccaacatctggagtcgaccaagagagaagcagcaagaggcggataag
caccgtgcgcaattctcgaatccagaaagtgatcatttgaccctactgaatgtgtatacg
gcatggaaaaccaacaggtgttctgacaattggtgttatgagcattatattcaagcacgg
gggcttcgaagggtagaagatgtgcgtaaacagttactaagtttaatggaccgttatcac
cagcccgtaatatcatgtggtcgaaaccgggaattaattttgcgtgcattgtgttctgga
cattttacgaatgtagcaaagagagactcacatgaaggatgttatcgaacgacggtggag
aatgcacaagtgtatatgcatcccagtagtgtgttattcggaaaacctgcggaatgggta
atttaccatgaattaattcagacgacgaaggagtatatgcacacggtaagcacgattcat
ccacgatggctggtggaggtggcaccgacattttttaaatttgcgaatccaaaccagatt
tccaagtcgaagaagggaacgaaagttgtgcctctattcaatcgatttgaaaaagcagac
gaatggagaatatccaagcagaagaaaggaaggtaa
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integrated database retrieval system
