Schizosaccharomyces osmophilus (fission yeast): SOMG_01938
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Entry
SOMG_01938 CDS
T09274
Symbol
taf2
Name
(RefSeq) TATA-binding protein associated factor Taf2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SOMG_01938 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
som01002
]
SOMG_01938 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_01938 (taf2)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_01938 (taf2)
Peptidases and inhibitors [BR:
som01002
]
Metallo peptidases
Family M1
SOMG_01938 (taf2)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SOMG_01938 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
SOMG_01938 (taf2)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
SOMG_01938 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
80875420
NCBI-ProteinID:
XP_056035094
UniProt:
A0AAE9W8M2
LinkDB
All DBs
Position
1:complement(join(4264869..4265024,4265076..4265214,4265267..4268330,4268424..4268538,4268584..4268628))
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AA seq
1172 aa
AA seq
DB search
MSQSVDVPARGLIIYKVAIDIDFGSQTINGRTDINIMPIDPELEKIVLDCYQADIHACYI
NNEPAKFVYDDALRRLRIQEPSSNVSHHHQLNSQLESTVNDLGGLSIFLPKSKGEEPAPV
LVSVEFSVHQPTSGITFVGVDPIDHRYPHTYTNNSITPYSTSSWLPCVDGIWERSTWEFE
ITIPKTLGALSKPSSNQLNGFASESLSQKASEDDDMQGGFDHNQHTSVTETDFSEDHDME
VICCGDLVDQVTHPKATHKKTVYFTVSTPVAPNYIAFSAGPFKHINLTDFREPEDDDAMG
SSAIEIAGYYLPKYAEEVENSCVFMYKAMDFFVREYGSYPFNAFKLCFVDETNYPIISTP
SLVIASNSLLFPKNNLDDIYESTKTLTWALASQWIGVYLIPKAWDDLWLIFGLSYFITGL
FLKKMMGNNDHRFRLKMDVLKLLELDIGRPPIAHPNLTLPIDPNTLDFIALKAPLVIHIL
ERRLTKTGGSLGMSRVIPKLLLQVMSGHMLNGCLSTSHFLKTCEKASHMRLDIFAQQWIF
GYGYPIFRVVQRFNRKKMIIEMGIDQVQTKENPSIPASEENFVSDAIRHLNDKPVASGLP
VFSGPMTIRIHEADGTPYEHVVELKDSFTKLDIQYNTKYKRISRNRSTKNVRKDNGDHGG
DDSDYVIRSLGDVLQSDEDIEKWKLYDYTKEDEDTMATEAFEWIRVDADFEWICDLRVRQ
PEHMFVSQIQQDRDVVAQLETIRHFTGNSFTISRQVSTVLLRTLLDTRYYYGVRQEAAQA
LANCAAPDLDWIGYYHLRTAFLESFCFENSTIPKSNDFTNISEYYVKCAMVKAFANVRDR
KGVTPSSVKKLLLDLLCFNDNANNEFSDSHYICLLIESLVDALIPRGETVQYAFSDPEHM
EFVHQAISEIDRHMRIDACMPSYKNIITIKALEAKIRLGRTFHLNYGPRELFPYTQESNY
NSVRSVAYDLMLQSGALKNDALIKYMFYILVNDLSPAVRRSLMYSIQKGFGCLARGGAKT
DFASDDLIVEEDITKAIEKRIDITSRASISGAIEALRNDVGQNRVLSDEMWKAINDPKID
LMTKRNLLMICRVLYKAKSSVIVTLKIPSLIPRLRAIHLGKGKIVIKKAPLKQIGKNKEK
TPPQIPDPSPIVNNTSNNNKPKGPTLKIKLKL
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatcggtggatgttcccgcgcgggggctcataatatataaagttgcaattgac
attgactttggttcgcaaacgataaatgggagaacggatataaatataatgcccattgat
cctgagttagaaaaaatcgttttagactgctatcaagctgatattcacgcatgctatata
aataatgaaccagccaagtttgtttacgatgatgctttacggcggctgcgtatacaggaa
ccaagtagtaacgtaagccatcaccatcagctgaattctcaacttgaatcaactgtgaat
gatttaggaggcttatcaatcttcttaccaaaatcaaagggagaggaacctgcacctgta
ttggtgtcggtcgaattctctgttcaccagcctacgtcgggcataacattcgttggcgtt
gatcccatcgatcatcgttatcctcacacttacaccaacaattctataaccccttatagc
acatcatcctggcttccttgcgtcgatggtatatgggagcgttccacctgggagtttgaa
attactatccctaaaactcttggagctctctctaagccttctagtaaccaactgaatgga
tttgcaagtgaatctttgtcacaaaaggcttctgaggatgatgatatgcaaggtggtttt
gaccacaaccaacatacttctgttacagaaacagatttttctgaagatcatgatatggag
gttatttgctgtggtgatctagtagatcaggttacgcatccaaaagctactcataaaaag
actgtatattttactgtttctacgccagttgctccaaactatattgctttttcagctggc
ccattcaaacatataaacttaacagattttcgggaaccagaagatgatgatgcaatgggt
tcaagtgctatcgaaattgctggatattaccttcccaaatatgctgaagaagttgaaaac
agctgtgtatttatgtacaaagctatggactttttcgtgagagagtatggctcttaccca
tttaatgcgttcaaactttgctttgtcgatgaaacgaattatcctatcatttctactcca
tcccttgtcattgctagtaattctcttttatttcctaaaaacaatttagatgatatttat
gagtctacaaagacacttacctgggcgctggctagccagtggataggagtatatttaatt
cctaaagcttgggatgatttatggcttatatttggtttatcctatttcataacgggtcta
tttttgaaaaagatgatgggaaataatgatcatcgttttcggctaaaaatggatgtttta
aagctactagagttggacattggtcgtcctcctatagctcatcctaatttaactcttcca
attgatcctaacactttagatttcatagcattgaaagctccgcttgtaatccacatactt
gagcgccgtctaacaaagactggtggttctttaggaatgtcaagagtgatacctaagctg
ctgcttcaagttatgagtggtcatatgttaaacggatgcctaagtacttctcattttctc
aaaacgtgtgagaaagctagtcatatgcgtttagatatatttgctcagcagtggattttt
ggttatggatatcctatatttcgcgttgtccaaaggtttaatagaaaaaagatgatcatc
gaaatgggtattgatcaagttcaaactaaagaaaatccgtctatacctgcatcagaagaa
aattttgtttccgacgctataagacatttgaacgataagccggttgcttctggccttcca
gtgttcagtggaccgatgactatccgtattcatgaagccgacggtaccccttatgaacat
gttgtcgaactgaaagactcgttcacaaagcttgatatacagtataatacgaagtacaag
aggattagtcgtaatcgttccacgaaaaatgttcgcaaagataacggcgatcatggtggt
gatgattctgactatgtaattagaagcttgggtgacgtccttcaaagtgatgaagatatt
gaaaaatggaagctttatgactatacgaaggaggacgaagacaccatggctactgaagct
ttcgaatggatccgtgttgacgctgatttcgagtggatatgtgatctacgagttcgccaa
cctgaacatatgttcgtttcccaaattcaacaagatcgtgatgttgttgcgcaattagag
acgattagacatttcacgggaaatagctttacgatttctcgccaggtatccacggtcttg
cttagaactctattggatacccgttattactatggagtacgtcaagaagccgctcaggct
ttagctaattgtgccgcacctgacttggattggattggttattatcatttgcgcacggcg
tttttagaaagtttttgttttgaaaattcaactattccgaaaagcaacgatttcaccaat
atttctgaatattatgtaaaatgtgctatggttaaggcttttgcgaatgttcgtgatcgt
aaaggtgtcaccccgtcgtccgtgaagaagcttttattagatttactttgctttaacgac
aatgctaataatgagttctctgactctcattatatttgtctattgattgaatctctagtt
gatgctcttattccaagaggtgaaacggttcaatatgcattcagcgatcctgagcacatg
gagtttgttcaccaggcgataagcgagattgatcgacacatgcgcattgacgcttgcatg
ccctcatataaaaatatcatcacgattaaagccctggaagctaaaattcgcttgggaaga
acctttcatttaaattatggcccgagggagctatttccatatactcaggaaagcaattac
aactctgttcgctcagtcgcatatgatttgatgctccaatccggagctttgaaaaatgat
gctctaatcaaatacatgttttacatacttgtgaatgatctttcacctgctgtacgtcgc
tcattaatgtattctatccagaaaggatttggttgcttagcacgaggtggggccaaaaca
gactttgcatcagacgatttaatcgttgaagaagatattacgaaggctattgaaaaacgc
atagatattacatctcgagcgagtatatctggagccattgaggcactgcgaaacgatgtt
gggcaaaacagagtattatctgacgaaatgtggaaagctattaatgaccctaaaatagat
ttaatgaccaaacgaaatttattgatgatatgtcgagtgttgtacaaagctaaatcttca
gtaatcgttacactgaagattcccagtcttataccacgcttgcgtgccatccatcttgga
aaaggtaaaattgtcataaaaaaggcgccattaaaacaaattgggaaaaacaaagaaaaa
acaccacctcagatacccgatccaagtcccattgttaataatactagtaataataataag
ccgaaaggaccaactttgaaaatcaagttaaagctttag
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