Schizosaccharomyces osmophilus (fission yeast): SOMG_01978
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Entry
SOMG_01978 CDS
T09274
Symbol
sec21
Name
(RefSeq) coatomer gamma subunit Sec21
KO
K17267
coatomer subunit gamma
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_01978 (sec21)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
som04147
]
SOMG_01978 (sec21)
Membrane trafficking [BR:
som04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SOMG_01978 (sec21)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SOMG_01978 (sec21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
HEAT_2
Cnd1
RICTOR_N
Gcn1_N
DUF8079
Motif
Other DBs
NCBI-GeneID:
80875460
NCBI-ProteinID:
XP_056035722
UniProt:
A0AAF0AV19
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All DBs
Position
1:join(4353235..4353265,4353308..4355355,4355406..4356050)
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AA seq
907 aa
AA seq
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MSYSKKDEDNDESIFSNINQISVTQDARAFHQSSISPRKSRMLLCKIAYLLYTGDRFPEK
QATELFFGITKLFQHKDPNLRQFVYIIIKELSSIAQDVIMITSSIMKDTATGSEVVYRPN
AIRSLVRVIDANTVPAIERILTTAVVDPVSAVASAALVSAYHLYPVAKDVVSRWSNKAQD
ATTSHIVGRKVANSPFFATSLGYMPSASGISQYHALALLYRIRQSDHIAVLKIFRDIASK
VAGLSNSHAFVMYVRYVASLMDQYPDMRKDMVPLFHNWLKGKGDMVNLEIARNMIRLKTL
GDEDLRPVVAALTIFLTSHRSAARFSAIRTLNELAMTRPHLLYSCNPMIESLITDANRSI
ATYAITTLLKTGNEESVDRLMLQIANFMSEIPDNFKIIVVDAIRSLCLKFPRKQEAMLSF
LSNILSDEGGYEFKRAAIDAIFDMIKYIPESKEKALAELCEFIEDCEYPKIAVRILCILG
EEGPKAAEPTRFIRYIYNRIMLENAIVRSAAISALTKFGVNVKDNFVKHSVRVILSRCLD
DADDEVRDRAALSVKVLDDMDSFLPFVKSNKVPSIPALERSLVLYVTGDKFDQPFDIEAV
PTLTQEQIDAENLKVKTASTEISQVAPAPVVDESAEAVVKAETEFKSVLESIPEFSSFGP
VLKSSSLIDVTERETEYVVKAIKHIFEKHIVIQYQLQNTLTEVVLENVTVGCVSSNENLI
EEFVIPAPVAANEPVSLYVSFSYEGSDLFNTPTVIENVLRFTSKEIDPHTGKPEEEGYDD
EYNIDDLWLKYGDFCIPFTFSNFDEHWEQLDHESSAVYSLSEIESFKAACSHLVELLQMQ
PVDGTDNVNDDAPLHVLKLCGGFVSGGKVLAIIKMIRANGAEGVTIKLITRAEDEKATES
LPTAFEG
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagttattccaaaaaagatgaagataacgatgagtcgatattctcgaatattaatcag
atttctgtaacgcaagatgcaagagcatttcaccaatcatcaatttcaccccggaaaagc
cggatgttgctttgcaagattgcatatctgttgtatacaggagatcgatttcctgaaaag
caagcaactgaattgttttttggcatcacgaagctttttcagcacaaggatcctaatcta
agacaatttgtttacattataatcaaggaattgtcttcgatcgcgcaggatgtgattatg
attactagtagtattatgaaagacaccgcaacggggagtgaagtggtttatcgtccgaac
gctatacgttcacttgttcgggtaattgacgcgaacactgttcccgctattgagcgtatt
cttacaaccgctgtcgttgatccagtttctgctgttgctagcgctgcgttggtatccgcg
tatcacttatatccagtagccaaagatgtggtatcccgctggagcaacaaggctcaggat
gctacaacttctcatattgttggcagaaaggttgctaattcgcccttctttgccacttct
ttaggttatatgccttcagccagcggtatctcccaatatcatgcacttgctctgttatat
agaattagacagtctgaccatattgctgtcttaaaaatatttcgggatattgcttcgaag
gttgctggactttccaattctcatgcttttgtcatgtacgtccgttatgttgctagtctt
atggatcaatatcccgacatgcgtaaagacatggtacctttgtttcacaactggttgaaa
ggtaaaggcgatatggtcaatttggagattgctagaaacatgattcgcctaaagaccctt
ggtgatgaggatttacgtcccgtagtcgctgcattaactatattccttacctcccatcgc
tctgccgctcgcttttctgcaatccgtactttaaatgaattagccatgacccgacctcat
ctattgtactcttgcaatcctatgatcgaaagtctaattactgatgcgaaccgctccata
gctacttatgctattaccactttactcaaaaccggaaatgaagaatctgttgatcgtctc
atgttacaaatagctaattttatgtctgaaattcccgataacttcaagattatcgtcgtt
gatgccattcgttccttatgtttgaaattccctcgtaaacaagaggcgatgttatccttt
cttagcaatatacttagtgacgaaggtggttacgagtttaaacgtgctgctatcgatgct
attttcgatatgatcaaatacattcctgaatcgaaggagaaagcccttgccgagctatgc
gagtttattgaagactgcgagtatccaaagattgcagttcgtatcctttgtatactaggt
gaagaaggacctaaagctgcagaaccaacaagatttattcggtatatctataacagaatt
atgcttgaaaatgcaattgtccgttcggccgctattagtgcgctcactaaatttggtgtc
aatgtcaaggacaattttgttaagcatagcgtaagagttattctctccagatgcttggat
gatgctgatgatgaggtgcgcgatcgggctgctttaagcgttaaagttttggatgacatg
gattccttcctgccttttgtcaaatctaataaagttccttctattccagcattggagcgt
agccttgttctttacgttactggtgacaaatttgaccaacctttcgacattgaggccgtg
ccaacgttaactcaagaacaaattgatgcagaaaatctcaaggttaagacggcatccact
gagatttctcaagttgcaccagctccagtcgttgatgaaagcgctgaagcggtcgtcaaa
gccgaaaccgaatttaagtctgttttggaatccatccctgagttcagttcttttggtccg
gttttgaagtcatcttctttaattgatgttaccgaacgtgaaactgagtacgtggttaag
gccattaagcatatatttgaaaaacatattgtcattcagtatcaacttcagaatacatta
acggaggttgttttggagaatgtcaccgttggctgcgtatcatctaatgaaaatttaatc
gaggaatttgtgatccctgcgccagttgctgctaacgaaccagtttcactttatgtcagt
ttctcgtatgaaggttctgatttgttcaatactcctacagtcattgaaaatgtactacgc
tttacttctaaagagattgatcctcatactggcaaaccggaagaagaaggttacgacgat
gagtacaatattgacgatttgtggcttaagtatggagacttttgtattcctttcactttc
tccaattttgatgaacattgggagcaacttgatcatgaaagttccgcagtttattctctt
agtgaaatagagtctttcaaagccgcatgctctcacttggtggagcttctgcaaatgcag
cccgtggatggaacagataatgtaaacgatgatgcacccttgcatgtactgaaattgtgc
ggtggatttgtttccggaggaaaagtgcttgcaattataaagatgattcgtgcgaacggc
gcggaaggtgtcaccatcaaattaattacaagagccgaagacgagaaagctacagaaagt
ttgccaaccgcttttgaaggataa
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