Schizosaccharomyces osmophilus (fission yeast): SOMG_02001
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Entry
SOMG_02001 CDS
T09274
Symbol
alp13
Name
(RefSeq) MRG family Clr6 histone deacetylase complex subunit Alp13
KO
K11339
mortality factor 4-like protein 1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SOMG_02001 (alp13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_02001 (alp13)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_02001 (alp13)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
SOMG_02001 (alp13)
NuA4 complex
SOMG_02001 (alp13)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
SOMG_02001 (alp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MRG
MSL3_chromo-like
Tudor-knot
PWWP
Chromo
Motif
Other DBs
NCBI-GeneID:
80875483
NCBI-ProteinID:
XP_056035576
UniProt:
A0AAE9WB32
LinkDB
All DBs
Position
1:complement(join(4408115..4408199,4408249..4409177))
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AA seq
337 aa
AA seq
DB search
MSYKVNERVLCFHGPLLYEAKIIDTEKKEDSSTYLIHYRGWKNSWDEWVGPDRILKWNEE
NLKTQKELKSNAMAAKQKSAAAKKAASLIPKGGEASGQASKPTGKRSRESSATTMDGDSR
ETPQRTKTQKSASPVPHVIKNEAVSEAAVDAAVKAVEEESVDEEPPLPKHKIRVPDVLKL
WLVDDWEHITKHLQLISLPRKPTVRAAIAAFRESKISSLTNEIDVDVFEQAMAGLVIYFN
KCLGNMLLYRFERQQYMEVRRDYPGVEMCDIYGAEHLIRLFVSLPELIDHTNMDSQSIDC
LLGYIEEFLQYLVLHKEEYFINKYQDASPNYRSLIGV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtataaagtcaatgaacgggtgttatgctttcatggacctttgctttatgaagct
aaaattatagacacagaaaaaaaggaagattcctcaacctacttgattcactatagagga
tggaaaaatagctgggatgagtgggtcggacctgatcgaatactaaagtggaatgaagaa
aatttgaaaacccaaaaggaattaaagagtaatgctatggcagctaaacaaaaatctgcg
gcggcgaaaaaggcagcttctttaattcccaagggtggtgaagcttcaggtcaagccagt
aaacctacaggaaaacggtctcgggaatctagcgctactacgatggatggtgactctcgt
gaaacacctcaaagaacgaaaacccaaaaatcagcctcaccggtacctcacgttataaaa
aacgaggcggtttctgaagctgctgtagacgcggcagtaaaggctgttgaagaagaatct
gtagatgaagaacctccattacctaagcataagatccgtgtgcctgatgttttgaagctt
tggttggtagatgattgggaacatatcacaaagcatcttcagctaatatcgttgcctcga
aagcctactgtgcgagctgccattgctgctttccgggaatccaaaatctcttctttgacg
aacgaaattgatgttgatgtgtttgagcaagcaatggctggactagttatttattttaat
aagtgccttggaaacatgctactttatcgttttgaaaggcagcaatacatggaagttcga
agagactatcctggagttgaaatgtgtgatatttatggcgctgagcacctgatacgactt
tttgttagtttacctgaattaattgaccatacgaacatggactcacaatcgattgactgc
ttgttaggatatatcgaggagtttttacaatatcttgtactgcataaggaggagtatttt
attaataagtatcaagatgcttccccaaactatcgatccttaatcggcgtttaa
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