Schizosaccharomyces osmophilus (fission yeast): SOMG_02065
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Entry
SOMG_02065 CDS
T09274
Symbol
lsd2
Name
(RefSeq) histone demethylase SWIRM2
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
HMG_box
NAD_binding_9
Pyr_redox_2
MurD-like_N
DAO
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
80875547
NCBI-ProteinID:
XP_056035947
UniProt:
A0AAF0AV94
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Position
1:complement(join(4549847..4551070,4551120..4553528))
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AA seq
1210 aa
AA seq
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MNGNENNQSNRYDFQQMTDGEHVAPSSFDSSNNANSSQSQLASSEQALLAILGGGLQQMN
TNNPNPNGYQRNVYRSDGSLNVPSGNMLNTSWPGYNPNFVQGRYDPPFQPYLMNQHPTQP
FPQPMMGSTPSTPSQQSNLSSIGLPPQLSSALPSQKQNHFAQLLEQNPAASAQFPNTFAQ
RSAAPDDAASIPLHPNQSFANTPNSFPNLPYSLDPSHVSTQQLLSTYRDQVAPSVRPYPY
RTADTFLPSQLLSTADLSKHVDMDSAAMPSAPVNNNISPAASSFPVIPSAPSTSPMASAT
FFEPTEFATPHDQTSTLEHPRSLLEWSSQMSSHTTPMAGASVPVSSLKSFYRMAYEAAKL
CNLNPAALEPFEKQMLSDRLQDSLVLFHYLQVRNSICWLWRRNPTLPISKVEAQGVCADR
CLFPLAILAYEFLVRYGYINYGCLSFESIVTPNIQNTSPSPQEKQKTIVVVGAGLTGLAC
ARHLTSLFTQFTSSFSSKAESIPKIILLESKQRTGGRIYSRVTPPANASFTDQDAMHDLP
NISEAMDFGFQFLTSGSDNVLFTLIEQQLGLQTFPLDGVDLLHNEQDNKMFDITNSKRLG
ALWTRLLHLASLLTNESSDMTSSNQFFQNFQSFLDEICPNHEPGPFTTEYMPHLSFKEIL
IFLIQKISSYLKLALDEKQFLTWSLISDHADDILHASKSNSDWNFDLGSSTPRVVKNGLS
QLSWALQSYPYPLNIQYGKSVCEIKNEISKCYVHCTDSSVYEADHVVMACSPYRLTSEIN
IQPPLPSQILDNLKSTQYASGRKLILRYSKAFWKKDIRSFGVLPLYDNIEGDLSFSATGN
SMPVSRVWNMFPITEQPILIADVMETAVGPGNEGASLIQILNSWLMDHFADQANDSAELL
DCWEINWSNGNPMDGLFVQKSNLSDSGVIQKSGSFSLGCLHFAGDYLQSALSGSSMSKSY
LAGISVCTEIINDLAQLGLTLPVMGETARNELEEYMQRTTTKHYDTDVEVQRHLSYRARY
RLKRQERLDEHKEESELLVTELLGYIPEPPIKPSANPFLLYQKMQWHVCRALADDEKKKL
TGDSEAKATINEIRAKLGKSWRQLDDLGKKPWVEEIAARREAYAGKNMRYQQLAKEYELR
AEQIRNDHTAKARDEPIPEDETRLYILAQREEAEQKNIVDEDDGSHSAEGSDEEYRDDGG
SSDSGGNALN
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaatgagaacaatcagagtaaccgatatgactttcagcagatgacagatggt
gaacatgttgcgccctccagttttgactcgtcaaacaatgccaattcttcacagtcgcag
cttgcaagcagtgaacaggctttacttgctattttaggaggtggcttacaacagatgaat
acaaataatccaaatccaaatgggtatcaacgaaatgtttatcgttccgatggcagttta
aatgttccttcggggaacatgctgaatacttcatggcctggctataatccaaacttcgtg
caaggaagatatgatccgccgtttcaaccttatttgatgaaccaacatccgacacaacct
tttcctcaaccgatgatgggttccactccatctacgccctctcagcagtcgaatctttct
tctataggattacctcctcaattgtcttcagctcttccatctcaaaagcaaaaccatttt
gctcagttgctggaacaaaatcctgccgcctctgcccaatttcccaatacatttgcccaa
cgctcagcagctccagatgatgctgcgtcaatccctttgcatccaaatcaatcatttgct
aataccccaaattcatttccgaatcttccatactctttagacccttcacatgtttctact
cagcaacttttatccacttatagagatcaagtggcaccttctgtgcgcccttacccgtac
cgaactgctgatacgtttcttccttcacagctcctttctacagccgatttatccaaacat
gttgacatggattctgctgccatgccgtctgcacctgtgaacaacaatatctcaccggct
gcttcctcttttccagtcatcccatccgctcctagtacctcaccaatggcttctgctact
ttttttgagcctaccgagtttgcgacaccccacgatcaaacgtctaccctagagcaccct
aggtccctgctagagtggtctagtcaaatgtcatctcatacgacccccatggctggtgcc
agcgtccccgtcagttctttgaaatctttttatagaatggcttacgaagctgcaaaacta
tgcaacttgaatccagctgctttggaacctttcgaaaaacaaatgttatctgataggcta
caggattcattagttttgtttcattacttacaagttcggaattcaatctgttggttatgg
cgtagaaatcctactcttcctatttccaaggttgaggctcaaggcgtttgtgccgataga
tgtttgtttcctttggctattttggcttatgagtttcttgtaagatatggatacattaat
tacggatgtttgtcttttgagtcgatcgttacccccaatattcaaaacacatctccttcg
ccgcaggagaaacaaaaaaccattgttgttgtaggtgcgggccttacaggtcttgcttgt
gctaggcacctgacgtctctctttactcagtttacttcttcattttcttctaaagcggaa
tccattcccaagattattttattagaaagtaagcaaagaactggtggccgaatttatagc
cgcgtcactcctcctgctaatgcatccttcaccgaccaggatgctatgcacgatttgccc
aacatttcagaagcgatggattttggtttccagtttttaacttctggatcggacaacgtt
ttatttacccttatagaacaacagcttggtctacaaacatttcccttggacggggtcgat
cttttacacaatgagcaagacaataaaatgtttgatattactaattcaaagcggctgggg
gctttatggacgaggcttttgcaccttgcttctttactgacgaatgaatcttccgacatg
acttccagtaatcaattttttcaaaattttcagtcatttcttgatgagatttgtccaaac
catgagcctggtccatttactactgaatatatgccacacttgtcttttaaggaaatcctc
atatttttgatccagaaaatttcctcttatttgaagttggcattagatgaaaaacaattc
ttgacgtggtctttgatttcagatcacgcggatgacattttgcacgcttcgaaaagtaat
tctgattggaactttgatttaggaagttcgacacccagagtggtgaaaaacggactttcc
caattaagctgggccctacagtcctacccgtatccattaaatatacaatatggaaaaagt
gtctgtgaaataaaaaatgaaatctccaaatgctatgtgcattgtacggactctagcgtt
tacgaggctgatcatgtggtgatggcttgttcaccgtatcgtcttacctccgaaatcaat
atacagccgcctcttccgtctcaaatacttgataacctgaagagtactcaatatgcttcc
ggaagaaagttaatcctgaggtattcgaaagctttttggaaaaaagatatacggtcattt
ggtgtactacctttgtatgataatattgaaggcgatctaagtttttctgctactggaaat
tccatgccggtatctagggtatggaatatgtttccaataacagaacaacctattctaata
gctgatgtaatggaaactgccgttggtcctggaaatgaaggcgcgtcgctaattcaaata
ttgaactcctggttaatggaccattttgctgaccaagcgaacgattctgctgagcttctg
gattgttgggaaataaattggtccaatggcaatcctatggacggactgtttgttcaaaaa
agcaatctttctgactctggtgttattcaaaaaagtggttcttttagtttgggatgcctt
cactttgcaggagattatttgcaatctgcactttccggttcatcaatgtcaaagtcgtat
ttggcaggcatttctgtatgtacagaaataattaatgatttggcacaactcggacttaca
ctacctgtgatgggagaaacagctcgtaatgagcttgaagagtatatgcaacgaacaact
acgaaacattatgacacagatgttgaagttcagcgacatctttcctatcgcgctagatat
cgtctcaaacggcaggagcgactggatgaacataaagaagaaagtgagctgttggttacc
gagctattaggctatatacctgagcctccaattaaaccaagtgcaaatccgtttttgttg
tatcaaaaaatgcagtggcatgtatgccgagcacttgctgatgatgaaaagaaaaaactt
actggtgatagcgaagctaaagctactataaacgaaattcgtgcaaaactaggaaaatca
tggcggcagttggatgatttaggtaaaaaaccatgggttgaggagattgcagctcgccga
gaagcttatgctggaaaaaatatgcgttatcaacaattagccaaagagtatgagctacgc
gccgaacaaattcgaaatgatcatacagcaaaagctcgtgatgagcctataccggaagac
gaaactcgactctacatattggctcaaagagaagaagccgaacaaaaaaatatagttgat
gaagatgatggctctcatagtgctgagggcagcgacgaagaataccgtgatgacggcggt
tcttcagattctggcggcaatgctcttaattaa
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