Schizosaccharomyces osmophilus (fission yeast): SOMG_02089
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Entry
SOMG_02089 CDS
T09274
Symbol
pab1
Name
(RefSeq) serine/threonine protein phosphatase PP2A regulatory subunit B-55 Pab1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03015
mRNA surveillance pathway
som04111
Cell cycle - yeast
som04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SOMG_02089 (pab1)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
SOMG_02089 (pab1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
SOMG_02089 (pab1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
som01009
]
SOMG_02089 (pab1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_02089 (pab1)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_02089 (pab1)
Protein phosphatases and associated proteins [BR:
som01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
SOMG_02089 (pab1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
SOMG_02089 (pab1)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
SOMG_02089 (pab1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
80875571
NCBI-ProteinID:
XP_056037140
UniProt:
A0AAE9WCZ1
LinkDB
All DBs
Position
1:complement(join(4605827..4605850,4605903..4607191,4607257..4607297,4607343..4607386))
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AA seq
465 aa
AA seq
DB search
MDESEDLTGQWRFAQCFGDKGDAEDITEADIISAVEFDHSGDYLATGDKGGRVVLFERNH
SKKGCEYKFFTEFQSHEPEFDYLKSLEIEEKINKIRWCRRTNRAHFLLSTNDKTIKLWKL
YEKNLKVVAENNLSDEFRHPRPLLKPFTLPMQLKLPRLSHHDTIVAAYPRRVYSNAHAYH
INSISVNSDAETYISADDLRINLWNLGISDHSFNIVDIKPDNMEELTEVITSADFHPVNC
NHLMYSSSKGNIKLLDLRQSALCDNHTKLFEDQGDQDSKSFFSEIISSISDIKFSQNGRY
ILSRDYLSLKIWDINMEKMPVKTIPLHDVLRSKLCDLYENDCIFDKFECTFSGDGKHALS
GSYSNNFGIYPTDSSKLGDEGQVVLQADKAAFRARKSAASSTVKLNSMKNNDWDPRSPAP
MGSGSIGLDPDQLDYNKKIMHASWHPFEDSVAIAATNNLFVFSKL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatcagaagatttaacgggtcaatggagatttgcccaatgttttggcgacaag
ggtgatgctgaggacattacagaggctgatataatttcagccgtagaatttgatcattca
ggtgactaccttgcgactggcgataagggaggacgagtagtattattcgaacggaaccat
tccaaaaaaggctgcgaatacaaatttttcactgaatttcaaagtcacgaaccagagttt
gactacttaaagtcgctggagatcgaggaaaaaattaacaaaattcgttggtgtcgtcga
accaatcgagcacacttcttgttgtctacaaatgacaagacaataaagttatggaagctt
tatgaaaaaaacctaaaggttgttgcagaaaacaacctttctgacgaatttcgtcaccct
cggcctttgctaaagccctttactctacccatgcagctaaagcttcctcgcctcagtcat
catgatacgattgttgctgcatatcctcgtcgagtgtattccaatgcccatgcctaccac
atcaactcaatcagcgtgaattctgatgctgagacctacatttcagcagatgaccttcgc
atcaatctatggaacttgggcatatcagatcattctttcaatattgtggacattaagccc
gacaacatggaggaactaacagaagtcatcaccagtgctgattttcatccagtcaattgt
aaccatttaatgtacagtagtagcaaaggtaatatcaaacttttagaccttcgtcaatcc
gctctttgtgataatcatacgaagctttttgaagatcaaggggatcaggattcgaagagc
tttttttccgaaatcatttctagcatttcagacatcaagttctctcaaaacggccgttat
attttgtctagagattatctttcgttaaagatttgggatataaatatggaaaagatgcca
gtgaaaacaatacctcttcatgatgtgttgagatcaaagctctgtgatctttatgaaaat
gactgtatctttgacaagtttgaatgcaccttctctggagatggaaagcatgctttgtca
ggaagttacagtaacaattttggtatttatcctacggatagctctaaacttggtgacgaa
ggtcaagttgttttacaagcagacaaggctgcttttcgagctagaaaatcagccgcaagc
tctacggtcaaactaaattctatgaagaataacgattgggatcccaggtcacctgctccc
atgggctccggttccattggacttgatcccgatcaacttgattacaataagaagattatg
catgccagctggcatcctttcgaagactccgttgccattgccgcaacaaataatttgttt
gtatttagcaagctctaa
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