Schizosaccharomyces osmophilus (fission yeast): SOMG_02175
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Entry
SOMG_02175 CDS
T09274
Symbol
clr3
Name
(RefSeq) histone deacetylase (class II) Clr3
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
som01009
]
SOMG_02175 (clr3)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_02175 (clr3)
04131 Membrane trafficking [BR:
som04131
]
SOMG_02175 (clr3)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_02175 (clr3)
Enzymes [BR:
som01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
SOMG_02175 (clr3)
Protein phosphatases and associated proteins [BR:
som01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SOMG_02175 (clr3)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
SOMG_02175 (clr3)
Membrane trafficking [BR:
som04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SOMG_02175 (clr3)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
SOMG_02175 (clr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
80875656
NCBI-ProteinID:
XP_056037120
LinkDB
All DBs
Position
1:complement(4787894..4789924)
Genome browser
AA seq
676 aa
AA seq
DB search
MVMEKKLADDGPTTVTPWSVLLKKENDVSNQETLISSEDAASLEAIKKSGLCYDPRMRFH
ATLNEVDDHPEDPRRVLRVFEAIRKAGYVSNTPSPADAFLRLPSREATLEELLRVHTPEM
YEKITKTELMSREDLANLEKISDSLYFNNESAFCARLACGSAIETCAAVVTGKVKNAFAV
VRPPGHHAEPHKPGGFCLFNNVSVAARSMLQRFPDKVKRILIIDWDVHHGNGTQMAFYDD
PNVLYISIHRYEQGRFYPGTVYGCAENCGEGAGLGRSVNIPWPCSGMGDGDYVFAFQRVV
MPIAYEFNPDLVIISSGFDAAAGDHIGQCLVTPPAYAHMTQMLMGLADGKVFASLEGGYS
LDAISVSALAVAQSLIGIPPSRLHTVYASQHAVQTVDKVTEIQSQFWRCMRPKYIPANPD
NAHVSRLHDIIRSYQAKKLFEDWKITNLPILRDSLSETFANQALCSNDFFQKDVLVILIH
EAPLVLGDGRKDSNALKPSDSYLVDPASLYIEWAMQQNFGLIDVNIPEVVTGENKPYDML
EETKKLCTYIWDNYIELASAKNIFFIASGKAAEGVMNLIASRNVTKTVRCIVNFFGSEPL
TGLKTASEDDLPSWYFRHSLIFVHSSDECWKKPKKNKRRYGRLIQSEHHSGTSMLEHHYR
AVTQYFSHLLKKNGAS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggttatggaaaaaaaacttgctgacgacggacctactacggtaacaccttggtcagta
ttattgaaaaaagaaaacgatgtttcgaatcaggaaactctcatttcttctgaagatgca
gcatctttggaagcaattaagaaatccggcctttgctatgatccacgaatgcgatttcat
gcgactttgaatgaagtagacgatcacccagaagatcccaggcgtgtgcttcgtgtcttt
gaagcaattcgaaaggctggatacgtttcaaatacccctagtcctgctgatgcttttctt
cgccttccatcacgggaggctacattggaagagttattaagagtacatactcccgaaatg
tatgaaaaaatcactaaaactgaattaatgtctagagaggatctcgccaatcttgaaaaa
attagtgactccttgtactttaataacgagagtgcattttgtgcacgattggcctgtgga
agtgctattgaaacttgtgctgccgttgtcacaggaaaagtaaaaaacgcatttgccgtg
gttcgtcctcctggccatcatgcggagcctcataaacctggtggcttttgcttatttaac
aatgtctctgtggctgctagaagcatgcttcagcgatttcccgacaaagttaaaagaatt
ttgattatcgattgggatgtgcatcatggtaatggtactcagatggcgttttatgatgat
ccaaatgtattgtatatctctattcatcgttatgaacaaggacgtttctatcctggcacg
gtatatggctgtgcagaaaactgtggtgaaggtgccggcctaggccgtagtgtcaatatt
ccatggccatgctcgggcatgggtgatggtgattatgtctttgccttccagcgcgttgtt
atgcccattgcttatgagtttaatccagatttggtgattattagctctgggtttgatgca
gccgctggtgatcacattggtcagtgtttagtgacaccgccagcttatgctcatatgact
caaatgctgatgggtttggcagatgggaaagtttttgcttctttagaaggagggtatagt
ttggatgctataagtgtttctgctttagctgtagcgcaaagtttgattggaatacccccc
agtcgattgcatacggtgtatgcgtcacaacatgcagttcaaacagttgataaggttaca
gaaattcagtcgcaattttggagatgcatgcgaccaaaatatataccggctaatccggac
aatgctcatgttagtagacttcacgatattatacgatcatatcaggcaaaaaaactattt
gaagattggaaaataaccaatctgccgattttgcgcgattccctttctgaaacatttgcc
aaccaggcattatgctcgaatgatttttttcagaaagatgtcttggttatacttattcat
gaggcacctcttgttttaggggatggtagaaaagactccaatgccttgaagccatcagat
tcttatttagtagatcctgccagtctgtacatagaatgggccatgcaacaaaactttgga
ttaatagatgtcaatataccagaggtggtaacaggtgaaaacaaaccatacgatatgctt
gaagaaacgaagaagttatgcacatatatttgggataactacatagagcttgcatcagct
aaaaatattttctttattgcatcaggaaaagcagccgaaggagtaatgaacttgattgct
tcgcgtaatgtgacgaaaactgtgcgctgcattgttaatttctttggttcagaaccactt
acaggactgaaaactgcttctgaagatgatttaccaagctggtatttccgacactctctt
atttttgtgcattcttcagacgaatgctggaaaaagccaaagaaaaacaaacgaaggtac
ggtcgtttaattcaaagtgaacatcattccggaacaagcatgctagaacaccattaccgg
gctgtaacccagtacttttcacacttgttgaaaaaaaatggtgcatcatga
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