Schizosaccharomyces osmophilus (fission yeast): SOMG_02231
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Entry
SOMG_02231 CDS
T09274
Symbol
spt8
Name
(RefSeq) SAGA complex subunit Spt8
KO
K11360
transcriptional activator SPT8
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_02231 (spt8)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_02231 (spt8)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SOMG_02231 (spt8)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
SOMG_02231 (spt8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_RFWD3
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
80875712
NCBI-ProteinID:
XP_056035409
UniProt:
A0AAE9W989
LinkDB
All DBs
Position
1:complement(join(4904303..4905427,4905467..4905921,4905971..4906043))
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AA seq
550 aa
AA seq
DB search
MSSNSVKNSVPYDNAAYSMVLNSDALSPEEEDDVNLDQEKEENAEMEDEKQDDEEEAAEK
VGEEDMDADELEDENEEETQEQEGQNLEKKTEQYEVNPIEKLKERAIKADFYDIVPTLAI
PMATSVNTFAFTSDMKWLFTGGEDGYIRKYDFFPSINGDLSLTVAQRHPFVDTVTKAGIL
LNYWGNGYDDQSPSPVYSLAVHSKGLWALSGINNGDIVLYSTRHQEGYPVTSLRKHTAPV
SCLTLHPSEKKVLSGSWDKMVYNWDLNTGSVISSYAGECGQLSGIRYRPTEVPTSWGTDS
DDMRSLFGTPSSNGSYGDFDEEVEKAIDEETKSMQAPEEIGENGGNANKTEKQISQNKEK
EKNIPEETNASSDNSHTNPNATTMEDPNIFLTVSIDGVMNVWDHRMPDSVIKYPVPKGIP
PWSMSACWGADGNSIFVGRRNGIVEEFNIHSGTSPVRSLKMPNDSGPVSNVSSMLNGRHL
VIASFDNVRLYDLQSKSGIGFLIVPGHHGGLVSGLHVDPSCRFMFTASGNRGWQGTTTEV
LMGYQINVLP
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgaattcagtaaaaaattctgttccctatgataatgcggcttattcaatggtt
ctaaattcagatgcattatcaccagaagaagaagacgatgtaaatttagaccaagagaaa
gaagagaatgctgagatggaagatgaaaagcaggatgatgaggaggaagcagctgagaaa
gttggcgaagaagacatggatgcagatgaactggaagacgaaaacgaagaagaaacgcaa
gagcaggagggtcagaatctagagaaaaaaactgaacaatatgaggtgaatcctatagaa
aaattgaaggagagggcaatcaaggcagatttttatgacattgttccaaccttggctatt
cctatggccacaagcgtgaacacgtttgcctttacgtctgatatgaaatggttattcacc
ggtggagaagacggttatattcggaaatatgacttttttcccagtatcaacggtgacctg
tctttaacggtcgctcaaaggcatccattcgttgatactgttacgaaggctggaatttta
cttaattactgggggaatggttatgatgatcaatctccttctcctgtttacagcttagct
gtgcattcgaaaggtctgtgggccctttcgggaatcaataatggtgacatagtcttgtac
tcaactcggcatcaggaagggtatcctgtaacgtctttaagaaaacacactgctccggtt
tcttgtttaacgcttcatccatccgaaaaaaaagttttgagcggaagttgggacaaaatg
gtctataattgggatttgaatactggaagtgttatttcgtcctatgctggggaatgcggt
caactttctggaattaggtatcgcccgaccgaagtgccaacctcttgggggaccgattct
gatgatatgagaagtttgtttgggacaccctctagcaatggatcctacggtgattttgat
gaagaagtcgaaaaggctattgacgaagaaacaaaatccatgcaagcaccagaagaaatt
ggagagaacggtgggaatgccaacaaaactgaaaaacaaatatctcaaaacaaagagaaa
gaaaaaaatatccctgaagaaacgaatgcctcttctgataattctcatacgaaccctaat
gcaacaactatggaagatccaaatatttttctgacagtttcaattgatggagtgatgaac
gtatgggatcatcgtatgccagattctgtcatcaaatatcctgtaccaaaaggaattcct
ccatggtctatgtctgcttgttggggtgccgacggtaacagcatatttgttggtcgtagg
aatggaattgtagaggaatttaatatccattctggaacaagccccgtaagatctttaaaa
atgcctaatgattctggtcctgtctcgaacgtcagttccatgcttaatggtcggcatttg
gtaattgcttcttttgataatgttcgcttgtacgatcttcaaagcaaatccggaattgga
tttttgattgttcctgggcaccatgggggacttgtgagtggtttgcatgttgatccatca
tgtagattcatgtttacggcttctggtaatagaggttggcagggaactacgacggaggtt
ttgatgggttatcaaattaatgttcttccctaa
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