KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_02231
Entry
SOMG_02231        CDS       T09274                                 
Symbol
spt8
Name
(RefSeq) SAGA complex subunit Spt8
  KO
K11360  transcriptional activator SPT8
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:som00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:som03021]
    SOMG_02231 (spt8)
   03036 Chromosome and associated proteins [BR:som03036]
    SOMG_02231 (spt8)
Transcription machinery [BR:som03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     SOMG_02231 (spt8)
Chromosome and associated proteins [BR:som03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     SOMG_02231 (spt8)
SSDB
Motif
Pfam: Beta-prop_SPT8 WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st WD40_RFWD3 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 CCD97-like_C
Other DBs
NCBI-GeneID: 80875712
NCBI-ProteinID: XP_056035409
UniProt: A0AAE9W989
LinkDB
Position
1:complement(join(4904303..4905427,4905467..4905921,4905971..4906043))
AA seq 550 aa
MSSNSVKNSVPYDNAAYSMVLNSDALSPEEEDDVNLDQEKEENAEMEDEKQDDEEEAAEK
VGEEDMDADELEDENEEETQEQEGQNLEKKTEQYEVNPIEKLKERAIKADFYDIVPTLAI
PMATSVNTFAFTSDMKWLFTGGEDGYIRKYDFFPSINGDLSLTVAQRHPFVDTVTKAGIL
LNYWGNGYDDQSPSPVYSLAVHSKGLWALSGINNGDIVLYSTRHQEGYPVTSLRKHTAPV
SCLTLHPSEKKVLSGSWDKMVYNWDLNTGSVISSYAGECGQLSGIRYRPTEVPTSWGTDS
DDMRSLFGTPSSNGSYGDFDEEVEKAIDEETKSMQAPEEIGENGGNANKTEKQISQNKEK
EKNIPEETNASSDNSHTNPNATTMEDPNIFLTVSIDGVMNVWDHRMPDSVIKYPVPKGIP
PWSMSACWGADGNSIFVGRRNGIVEEFNIHSGTSPVRSLKMPNDSGPVSNVSSMLNGRHL
VIASFDNVRLYDLQSKSGIGFLIVPGHHGGLVSGLHVDPSCRFMFTASGNRGWQGTTTEV
LMGYQINVLP
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgtcctcgaattcagtaaaaaattctgttccctatgataatgcggcttattcaatggtt
ctaaattcagatgcattatcaccagaagaagaagacgatgtaaatttagaccaagagaaa
gaagagaatgctgagatggaagatgaaaagcaggatgatgaggaggaagcagctgagaaa
gttggcgaagaagacatggatgcagatgaactggaagacgaaaacgaagaagaaacgcaa
gagcaggagggtcagaatctagagaaaaaaactgaacaatatgaggtgaatcctatagaa
aaattgaaggagagggcaatcaaggcagatttttatgacattgttccaaccttggctatt
cctatggccacaagcgtgaacacgtttgcctttacgtctgatatgaaatggttattcacc
ggtggagaagacggttatattcggaaatatgacttttttcccagtatcaacggtgacctg
tctttaacggtcgctcaaaggcatccattcgttgatactgttacgaaggctggaatttta
cttaattactgggggaatggttatgatgatcaatctccttctcctgtttacagcttagct
gtgcattcgaaaggtctgtgggccctttcgggaatcaataatggtgacatagtcttgtac
tcaactcggcatcaggaagggtatcctgtaacgtctttaagaaaacacactgctccggtt
tcttgtttaacgcttcatccatccgaaaaaaaagttttgagcggaagttgggacaaaatg
gtctataattgggatttgaatactggaagtgttatttcgtcctatgctggggaatgcggt
caactttctggaattaggtatcgcccgaccgaagtgccaacctcttgggggaccgattct
gatgatatgagaagtttgtttgggacaccctctagcaatggatcctacggtgattttgat
gaagaagtcgaaaaggctattgacgaagaaacaaaatccatgcaagcaccagaagaaatt
ggagagaacggtgggaatgccaacaaaactgaaaaacaaatatctcaaaacaaagagaaa
gaaaaaaatatccctgaagaaacgaatgcctcttctgataattctcatacgaaccctaat
gcaacaactatggaagatccaaatatttttctgacagtttcaattgatggagtgatgaac
gtatgggatcatcgtatgccagattctgtcatcaaatatcctgtaccaaaaggaattcct
ccatggtctatgtctgcttgttggggtgccgacggtaacagcatatttgttggtcgtagg
aatggaattgtagaggaatttaatatccattctggaacaagccccgtaagatctttaaaa
atgcctaatgattctggtcctgtctcgaacgtcagttccatgcttaatggtcggcatttg
gtaattgcttcttttgataatgttcgcttgtacgatcttcaaagcaaatccggaattgga
tttttgattgttcctgggcaccatgggggacttgtgagtggtttgcatgttgatccatca
tgtagattcatgtttacggcttctggtaatagaggttggcagggaactacgacggaggtt
ttgatgggttatcaaattaatgttcttccctaa

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