Schizosaccharomyces osmophilus (fission yeast): SOMG_02302
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Entry
SOMG_02302 CDS
T09274
Symbol
rrp46
Name
(RefSeq) exosome subunit Rrp46
KO
K12590
exosome complex component RRP46
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_02302 (rrp46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_02302 (rrp46)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SOMG_02302 (rrp46)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PapB
Motif
Other DBs
NCBI-GeneID:
80875783
NCBI-ProteinID:
XP_056035420
UniProt:
A0AAF0AU16
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Position
1:complement(join(5070187..5070818,5070908..5070962))
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AA seq
228 aa
AA seq
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MNRIGFLSQSDGSSEWKQGSTRVICNVNGPIEIKIRDEKLNKASVEVLVQPMNGASETLE
RMLSNRISSLLEDAIYLTTYPRTLIQVSIQVVEGNSRDTLAAAINGATLALLDAGISLKY
LPCAITCHWKDPLGLKEAKNVTAEEPTEMMHSIITLAYSVTTGEKKLILVETSGTIPDEE
FFLVLDKSPVHADQITQEMKTLFMNAYNREVSVGDNKEQGEDDVEMKE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaattgggtttttatcacagtcagacggatccagtgaatggaaacaaggatct
actcgtgtcatttgtaatgtgaatggtccaattgagattaaaattcgtgatgagaaacta
aacaaggcttctgtggaggttttggttcaacccatgaatggagcttctgaaacactcgaa
aggatgctttccaatagaatatctagtcttttagaagatgccatctatttaaccacttat
cctaggacattgattcaggtgtccatacaggtggtggaaggaaattcacgggatacactt
gcagctgcaatcaatggagctacactggcactgttggatgccggtatttccctaaaatac
cttccatgtgcgattacatgccactggaaagatcccttaggtttgaaggaggctaagaat
gtgaccgcagaagaaccaacagagatgatgcattccattatcaccttggcttacagtgtg
acgacgggagagaaaaaattaattctcgttgaaacttccggaacaattcctgatgaagag
ttctttttggttttagacaagtcgcctgttcatgctgatcagatcactcaggagatgaag
acgctgttcatgaatgcttacaacagagaagtatccgttggcgacaacaaggaacaaggg
gaagacgacgtggaaatgaaagaataa
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