KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_02392
Entry
SOMG_02392        CDS       T09274                                 
Symbol
uaf2
Name
(RefSeq) U2 small nuclear RNA auxiliary factor small subunit, U2AF-23
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:som00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SOMG_02392 (uaf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:som03041]
    SOMG_02392 (uaf2)
Spliceosome [BR:som03041]
 Complex A
  U2 snRNP components
   U2 related factors
    SOMG_02392 (uaf2)
 Complex B
    SOMG_02392 (uaf2)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 80875873
NCBI-ProteinID: XP_056037110
UniProt: A0AAE9WCX3
LinkDB
Position
1:join(5274837..5275170,5275275..5275627)
AA seq 228 aa
MNTILLPFITMASRLASIYGTEQDKVNCTFYSKIGACRHGERCSRKHVKPNFSQTILCPN
LYKNPIHEPAGKRMSDRELNFQFDAFYEDMFCEFAKYGEVEQIVVCDNVGDHLIGNVYVR
FKYEDSAQKAVDDLNSRWYSQKPVYAELSPVTDFREACCRQHETSECLRGGLCNFMHARK
PDHHLMRELNTSQRKYFTMNAYDEMTKKALNPQGSSDNWVGASVEQRR
NT seq 687 nt   +upstreamnt  +downstreamnt
atgaacactatccttttaccattcatcacaatggcaagtcgcttggcaagtatttacggt
acagagcaagacaaagtaaactgtacgttttattcaaaaattggtgcttgtcgacacgga
gaacgatgctctcgtaagcatgtgaagccaaatttcagtcaaacgattttgtgccccaat
ttgtataagaatccaatccacgaaccagcaggaaagcggatgtctgatcgcgaattgaat
ttccaatttgacgcgttttatgaagatatgttttgtgaatttgccaaatatggtgaagtg
gaacaaattgttgtttgtgacaacgtcggagaccatctaatcggaaacgtgtatgtgcgt
tttaagtatgaagattctgcacaaaaggctgtggacgatttgaattcacgttggtattcc
caaaagccagtatatgccgagttgtctcctgttaccgactttcgtgaggcctgttgccgt
cagcacgagacatcagaatgtttgcgcggtggcctgtgtaactttatgcatgccagaaag
ccagatcatcacttaatgcgggagttaaatacgtctcaacgtaaatactttactatgaat
gcttacgatgagatgacaaaaaaagctttgaatccacagggctcatcggataattgggtg
ggcgcgtcggttgagcaaagaagataa

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