Schizosaccharomyces osmophilus (fission yeast): SOMG_02415
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Entry
SOMG_02415 CDS
T09274
Symbol
usp104
Name
(RefSeq) U1 snRNP-associated protein Usp104
KO
K12821
pre-mRNA-processing factor 40
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_02415 (usp104)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
som03041
]
SOMG_02415 (usp104)
Spliceosome [BR:
som03041
]
Complex A
U1 snRNP components
U1 related factors
SOMG_02415 (usp104)
Complex B
SOMG_02415 (usp104)
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GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
YcbB
Motif
Other DBs
NCBI-GeneID:
80875896
NCBI-ProteinID:
XP_056037261
UniProt:
A0AAE9WBU0
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Position
1:5325345..5327411
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AA seq
688 aa
AA seq
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MSAPPWQQVSQDEEEGSIEYSTKSQEATEPVSDWHEVKTEDGRVYYYDSISRKSVWEKPE
ELMNEFERKLSKLAWKEYTTADGKQYWYNVNTRESVWEIPEEFRKAIAEETLPKTKQTLP
PAHHKQEARPEPYPESEAQSARPDREQATPSKDASSRKRAPNFVPSKEKRQRRGDHREED
FDTYEAAERAFFRFLDSFNVTPSWTWEKAVHELCTEKGYYVIKNPWERKCAFDAYIMNYL
TEQSDREKNRILTLRKDFFGLLKSRNDIRSYTFWRTVKSLLADQPAFLAAPTEFERQLLF
FEYRQKLKEDDEKQQKDNRKAAFDDFCVLLSKLELDPYTRWNTAQEKFESDPRYQKNPNM
KNLSHLEALTAYESHIKQLERQYIMEKQRLKKEKYRTERKNRDAFRILLLRLRQEKKINL
RTKWKEIFPLFKDDPRYLNMLGQPGSTPLDLFWDNIIELENDFREKRNVVLDCLQLLKLK
VEEDSDISLFVQRVMQGLKENNMDESVTEDIVLEVIFRIKEKIAHRKADEKKADERRIRR
KIDNLRSAIKYIEPPVPLTATYEEMRPVLSALPEFSAIDSEEYRAAAFDKYIRRQREKTT
SEKPIRARRGYYDEAEDGTRGGYSSGARVYETKPSLDYDEDYPMKSDQHVGPSGPVQPSS
RNDFNFLQSNAPPASGMDGESSEEGEIH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcctccctggcaacaagtatcgcaagatgaagaagaaggatcaatagagtat
tcgacaaagtcgcaggaggcgacggagccggtttctgactggcatgaagtgaaaaccgag
gatggtcgtgtatactattatgactcaatatctaggaagagtgtatgggaaaagccagag
gaactcatgaacgagtttgaacgaaaactgtcaaaattggcttggaaagagtacaccacg
gctgatggaaagcagtattggtataatgtaaatactcgtgaatctgtctgggaaattccc
gaagaatttagaaaagcgatcgccgaggagacacttccaaaaactaaacagactttgcct
ccggctcatcataaacaagaagcacgtcctgaaccgtatccagagtccgaggcccagtca
gcgagacctgacagagaacaggcaacaccttccaaagatgcaagttctcgaaagcgtgct
ccaaattttgtaccttctaaagaaaagcgtcaacgacgtggagatcaccgtgaagaggat
tttgatacctatgaggccgctgagcgagcttttttcagatttctggattcgttcaatgtt
accccgagctggacttgggagaaagcagttcatgaattatgtactgaaaaaggatattat
gtgattaaaaacccttgggaacggaaatgcgcttttgatgcttatattatgaattatttg
acggagcagagtgatagagaaaaaaatcgaattttgacacttcgaaaagacttttttggt
cttttgaaatcaagaaatgacatccgctcatacactttttggagaaccgttaaatcgctg
ttggctgatcaacctgcttttttggctgctcccaccgagtttgagcgacagttgttgttt
ttcgaatacagacaaaagttaaaggaagatgatgaaaagcaacaaaaagataatagaaaa
gcagctttcgatgatttttgtgtccttttgagcaagttggaattggatccttacacgagg
tggaacacggctcaagaaaagtttgaaagtgatccccgctatcaaaagaatccaaatatg
aaaaatttatcacatttagaagctctcacggcttatgagagtcacataaaacagcttgaa
cgccagtacattatggaaaagcaaagactaaagaaagagaagtatagaactgaaaggaag
aatcgtgatgctttccgaatccttttgcttcgtcttcgtcaggaaaagaagataaactta
cgcacgaaatggaaagaaatattccccctttttaaagatgatcctagatatctgaatatg
cttggccagcctggatccactcctttagaccttttttgggacaatattattgagttggaa
aatgatttccgggaaaagcgaaatgttgttttggattgtcttcagctattgaaactaaaa
gttgaagaagattctgatatttcattatttgtccaacgtgttatgcaaggcttaaaagaa
aacaatatggatgagtctgttacagaagatattgttctggaggttatttttcgtataaaa
gaaaagattgcacatcgtaaagctgatgaaaagaaagctgacgagcgtcggattcgacgg
aaaattgataaccttcgaagtgccatcaaatatatagaaccccctgttcctctcactgct
acgtatgaagaaatgaggcctgttttgtctgcattgcctgaattttctgccatagactcg
gaagaatatcgtgctgccgcctttgataaatacattcgtaggcaaagagaaaaaacaaca
tcagaaaagccgattagagcaaggagaggctattatgatgaagctgaagatggtacacgt
ggtggctactcgtctggggctcgcgtgtatgagacgaagccgtccttagactatgacgag
gattacccaatgaagtctgaccaacacgttgggccttctggcccggttcagccttcgagt
cggaatgattttaacttcttacagtcaaatgctcctcctgcgtctggcatggatggagaa
tcaagtgaggaaggtgaaatccactaa
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