Schizosaccharomyces osmophilus (fission yeast): SOMG_02528
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Entry
SOMG_02528 CDS
T09274
Symbol
rrp45
Name
(RefSeq) exosome subunit Rrp45
KO
K03678
exosome complex component RRP45
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_02528 (rrp45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_02528 (rrp45)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SOMG_02528 (rrp45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
80876009
NCBI-ProteinID:
XP_056037738
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All DBs
Position
2:join(54779..54942,55013..55132,55182..55773)
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AA seq
291 aa
AA seq
DB search
MSKSLEPSANNKGFLINALKKELRLDGRSLTDFRDLTIQFGEDYGQVDISLGSTRVMARI
SAEITKPYSDRPFDGIFAITTELTPLASPAFETGRVSEQEVIISRLIEQAIRRSNALDTE
SLCIVSGQKCWNVRASIHFINHDGNLVDAACIAVITALCHFRRPEITVLGDEVTVHSIDE
RVPVPLSVLHTPICVTFSFFEDGSLSAIDASLEEEELRTGSMTVTLNKNREICQIFKAGG
VTIDASSVVACAQTAFQKTTFIISEIQRALDEDLSKKETQFFGGSAKNQRS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagtcttgaaccttccgcaaataataagggctttcttatcaatgccctgaaa
aaagaactgagactggatggccgttcattaactgactttcgagatcttacaatccagttt
ggtgaagattatggtcaggtagacatttctttgggttcaactagggttatggcacgtatc
tctgctgaaattacgaagccatattcagatcgaccatttgatggaatctttgcaatcaca
actgagcttacaccacttgccagccctgcttttgagacaggaagagtatctgagcaagaa
gttatcatttcccgcctcattgaacaagcaattcgacgttcaaacgctttagacacagaa
tctctatgcatcgtttcaggacagaagtgctggaatgttcgtgcaagtatccatttcatt
aatcacgacggaaatttggtggatgctgcatgtatcgcagtgattacggccctttgtcat
tttcgaaggcctgaaatcactgttctcggcgatgaagttacagtgcattctatcgatgag
cgtgttcctgttcctctttccgttcttcataccccgatctgtgtaacgtttagcttcttt
gaagatggaagcttatcagctatagatgcatctcttgaagaagaagaactgcgtactggg
agtatgacagtcaccctcaacaaaaaccgtgaaatctgtcaaatctttaaagccggaggt
gttacaatagacgcttctagtgtggttgcatgtgctcaaactgctttccaaaaaacgaca
tttatcatttccgaaattcaacgggctttagatgaggatttgtctaaaaaagaaacgcaa
ttttttggaggttctgccaaaaaccaacgctcttaa
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