Schizosaccharomyces osmophilus (fission yeast): SOMG_02591
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Entry
SOMG_02591 CDS
T09274
Symbol
dbl8
Name
(RefSeq) ATP-dependent RNA helicase Dbl8
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_02591 (dbl8)
Enzymes [BR:
som01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SOMG_02591 (dbl8)
5.6.2.5 RNA 5'-3' helicase
SOMG_02591 (dbl8)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SOMG_02591 (dbl8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEN1_N
AAA_11
AAA_12
SEN1_barrel
AAA_30
AAA_19
UvrD-helicase
Viral_helicase1
DEAD
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
80876072
NCBI-ProteinID:
XP_056038235
UniProt:
A0AAE9WF01
LinkDB
All DBs
Position
2:182065..187938
Genome browser
AA seq
1957 aa
AA seq
DB search
MEDSKLFQELEQSIQDNQNSPSFKGSNKVLHLALSYLNVKRQDAHWVCNSRSKIAVRECF
FLFSFQDENDFLTWFKKHLDERLQACPSCILSYHHLVDEFKTICLNIFNFEPDTLSIVLE
KILQWDVSRLTKVLQRIPKVDSSTSSKPILCAFYEILYNVEFLKNETLFALFRKRFLEAG
FLRLSKKLVPGVVYLLFSDDEALRKWAFGILNGSEIIPANEFLNLQAPFLEEIRAIISNA
ANERFVKRFLNGFSALLNNVSSEYFDSLGKHGFEPISFVLRGLNKAPLGQYSSYVNCLHF
LLKCYRTVFWRASNLEPSQLINLVFDSEAHKHWLEQMIQGNEDCESEMLNWTIPFLKSIS
LEKHMPSVQILLEKCNVPLNEAKELTYASNPLFNSICEIYSWLFNEYFETISHCEDSQKA
YVESFQLIICSNFDVFFSNLKDYVSPFEQHSFRKAFEYRLNVDVYALRHTYRNYTQKRKI
RNLDLKFTEKSLSVFWKKLLSLLVERSHILANSILRSISSIYLIDKLDSPETNDYSKAVD
SFYQFLSKMLIIIQRWNLSSLKSLLDNPYNFSALLGFLFSPISDISNNAWTIVNLISVAE
NTSDAIDKLLKHRFSDSLRALSNIYSQWIKYRDFNSVKRLIYQGKMFINRLFHPLNGLLH
GSSISFKDEENCNALKAYWDNLWKFFAHFFIVLPSWPVKKEKDVLVDIMHVSLDCCQMLI
KSFNQVSEFINGIDISVSHSKSEASDDSKKALANSILNSLITLSYWLKLNDSNLLSSVVR
IICGMLKLFNNLSLPINQNTVDMIQKSSTAGDGSTILALSEREDLFLAISPYLPEHLQTK
PFHLTTEETSNVGEAALTSPDIYVIDEEPKQQEIPYSKLQQAHTKPVPANEDKGAANHFT
LSSKMLSKLEKKKDTTEQPQLARRNYIQKVGSKPANLGIGDLSELQSHRALNKLDAVAPL
KKPNLEPKRNLQLTSNDAESSESESESESDSDSNNKENENDGLFSLMRDASNQNKTNAPR
RQVQLLDINSLKTNNVVHPAQRHREAHQSIYTSRHRLFPDIQGFYRILLSWNPLLSSETA
ADEKNLSCRSIETSYSSPEIYEKTFMPFLFNECWAQIRAAIEESQYTPLELTLNSRTSVD
NFVEIGFTSRTITELQYLSDTDICVLSKSKKPSSPEKNDTSTLAKIQSLTRKKESIDIFV
RVNSDAKSLQEMIPGARFYLQKLFSATTSLREYSALKSLSYISLSRDILNANVIKSLDGA
DNEGLKKVMSSYGTNEPQAKAISAASSREGFTLVQGPPGTGKTKTILGMIGAILTSKGQG
LRFAAPGQLNPVQQKQKNRVLICAPSNAAIDEILMRLKDGVYDHEGIKFMPKVIRIGFTE
SINVHAKEFTLEEQMAKQMEITNLKKHEGSSDSGELRKKHDAILLERNKLRESVDSVRQA
GKDSSTLELKLREVTRQKNALEQSLDEMRNRQQSANRSMDVAKKQIQLQLLQDADVVCAT
LSASGHETLLNANISFPTVIIDEAAQAVELSSLIPLKYECKRCIMVGDPNQLPPTVLSKS
ASKNGYDQSLYVRMFKRNPSNTYLLSIQYRMHPEISKFPSHYFYQSKLIDGPNMVSVADR
PWHHDALFGVYRFFNVVSRESISRSKSLYNADEASFVLLLYEKLSQNFINIDFEGKIGIV
TPYRSQVQELRYQFQKKFGSVIFKYLDIHTVDGFQGQEKDIIIFSCVRSSMGNGIGFLQD
VRRLNVALTRARSSLYIVGSTEPLMQNEVFRNLIEDAKTRKCWMRVTFEQLLHWKSDTRK
ANSKSIKEHNNEGDDLIREKSDSLPRNERSPSLTPYAEPKQEIINAPTSSGSNNIAKDKE
LTRRPGNVKKPDMINSILPKDPSKEKKEDKKQKGTDDSSMPQNKRERSFGDPTDSRKPKK
PKGEKKQDDDQKTSKKSKKPKSKLALAAMARGFRPPT
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcgaaactcttccaagaactagaacaatcaattcaggataatcagaattca
ccttcatttaagggctctaataaagtccttcatttggctttatcatatttgaacgttaaa
cgccaagatgctcactgggtttgtaattcacgatcgaagattgctgtacgagaatgcttt
ttcctgttttcttttcaggatgaaaatgattttttgacatggttcaaaaagcatctggat
gaacgccttcaagcttgcccttcctgcatactgagctatcaccatttagttgatgaattt
aagactatatgcctcaatatttttaattttgagccagataccctttctatagtccttgag
aaaatattacaatgggatgtttccaggctaacgaaggttttgcaacgcattccaaaggtt
gattctagcacctcttcgaaaccaattttatgcgctttttatgaaatactgtacaatgtc
gagtttctaaaaaatgaaaccctttttgcgttgtttcgaaagaggtttttggaggccgga
tttcttcgattatctaagaagttggtcccaggggtcgtctaccttttattttctgacgat
gaggccttgagaaaatgggcatttggtattctcaacggttctgaaattatccctgcaaat
gaattcttaaatcttcaagcacccttccttgaggaaattcgtgctataattagcaatgca
gcaaatgaacgttttgtaaagcgcttcttgaatgggttttcagctctattaaataatgtt
tcgtctgaatatttcgactctttgggaaaacatggatttgaaccaatatcctttgtctta
cgcggattaaataaagcaccgttgggtcaatattcgtcttatgtaaattgtttgcatttt
ttattaaaatgctatagaaccgtgttttggcgagcctctaatcttgaaccttctcaactt
ataaacctggtttttgacagcgaagctcataaacattggttggaacagatgatacaggga
aatgaagactgcgagagcgaaatgttgaactggaccataccttttttaaaatctatctct
ttagaaaagcatatgcctagcgtgcaaatactgctcgagaagtgtaatgtacctctgaac
gaagccaaagaactcacgtatgcaagtaatcctctgtttaattctatttgtgaaatttat
tcttggcttttcaatgaatactttgagactatttctcattgcgaggattcacaaaaagca
tacgtagagtcctttcaattaattatatgctcaaattttgatgtctttttctctaatctt
aaagattatgtgagtccttttgagcaacattcatttagaaaggctttcgaatatcgccta
aatgttgatgtttatgctttacgacatacttatcgaaattacactcaaaagcgtaaaata
agaaacttagacttgaaatttactgagaaatctttatctgtcttttggaaaaagttactt
tctctcctcgtcgagcgtagtcatattttggctaattctattttgcgatccatctcctct
atatatctcatagacaagcttgattcgccggaaaccaatgattatagtaaagctgtagat
tcattttaccagtttttgtctaaaatgttgataattattcaacgttggaatctttcttct
ttgaaatctttgttggataatccttacaatttttccgccttgctaggatttcttttttct
ccaatttctgatatttcaaataatgcttggactatagtgaatttaatttctgttgctgag
aacacgagcgatgctatagacaagttattaaaacatcgattttccgattcacttcgagca
ctctcaaatatctattcacaatggatcaaatacagggatttcaacagcgttaagcggctt
atttatcaaggaaagatgttcataaatcgcctttttcaccctttaaatggtttattacat
ggcagtagcatttcgttcaaggatgaagaaaattgtaatgctttaaaagcatattgggac
aatttatggaaattttttgcccatttctttattgttctaccaagctggccggtaaagaaa
gaaaaggatgttcttgttgatataatgcatgtatcgttagactgttgccaaatgcttata
aagagctttaatcaagtttctgaattcataaatggcattgatatttcagtgtcccattcc
aaatcagaagctagcgacgattctaagaaagccttagctaattcgattttaaattctctt
attacactttcgtactggcttaagctaaacgattccaatttattatcttcagtggttaga
attatttgtggtatgctgaagttatttaataatttatctctgccgatcaaccaaaatact
gttgatatgattcaaaagtcatctacagctggggatggatccacgattcttgctttatct
gaacgtgaagatttatttcttgccatttcaccttatttacctgagcatttacaaacaaaa
cctttccatttgactacagaagaaacatcaaatgtgggagaagcggctttaaccagtcca
gatatttatgttatagatgaagaacccaaacaacaggaaataccttactcgaaacttcaa
caagctcatactaaacctgttcctgctaatgaagacaaaggagcagcaaatcattttact
ctttcgtcaaaaatgttgtccaagcttgaaaaaaagaaagatacgactgaacagccacaa
ctcgctcgccgaaattatattcaaaaggtggggtccaaacctgctaacttaggtattggt
gatttatcggagttacagtcacatagagctttgaacaaattggatgctgttgctccatta
aagaagccaaatttagaacctaagaggaacttacaattgacttcaaacgatgcagaatct
tccgaatctgaatctgaatccgagtcagattcagattcaaataataaggagaacgaaaac
gatggactattctctttaatgcgtgatgcttccaatcagaataaaacaaatgctccacgc
cgccaggtacagcttttagatataaattccttgaagaccaacaacgttgtacatcccgca
caacgtcatagagaagctcaccaaagcatttatacctctcggcatcgtttgtttcctgat
attcaaggtttttacagaatcctactaagctggaaccctctgctcagttctgaaacagct
gcggatgaaaaaaatttgagttgccggagtatagaaacttcatactcgtctccagaaatc
tatgaaaaaacttttatgcctttcttattcaacgaatgttgggctcaaattcgtgcagct
attgaagaaagccaatatacacctttagaattgacattgaatagtcgtacctcggttgat
aattttgttgaaataggttttacctctagaacaattactgagttacaatatctcagtgat
actgacatatgcgtgttatccaagtcaaaaaaacctagctcgcccgaaaaaaacgataca
tcaactcttgctaaaatacagtctttgacaagaaaaaaggaatcaattgatatttttgtt
cgtgttaattctgatgcaaaatcccttcaagaaatgattccgggtgctaggttctactta
cagaaactttttagtgccacaaccagtctgcgcgaatactctgcgctaaagtcactttca
tatattagtctttccagagatatcttaaatgccaacgtaatcaaatccttggatggcgct
gacaatgaaggtttaaaaaaagtcatgagttcttatggtactaatgaaccgcaagcaaaa
gcaatcagcgcagcttctagtagggaaggttttacgcttgtacaaggtcctccaggcaca
ggtaaaacaaagactattttaggaatgatcggtgcgattttgacttcaaaaggtcagggt
ttacgatttgccgcccctgggcaattgaatcctgttcaacaaaaacagaaaaatagggtt
ttaatttgcgcccctagtaatgctgcgatagacgaaattctaatgcgattaaaagacggt
gtatacgatcatgaaggaataaagtttatgcccaaagtaattcggataggtttcacagaa
tcgattaatgttcatgcaaaggagtttacattagaagaacagatggctaaacaaatggaa
atcacgaatctaaaaaagcatgaaggatcttctgattctggtgagctcagaaagaaacat
gacgctattcttttggaacgtaacaagttaagggaaagtgttgattcagttcgccaagct
ggcaaggatagctccacactggaactaaaacttagggaagttacacgtcaaaaaaatgcc
cttgaacaaagcttggatgaaatgcgcaacaggcagcaaagtgctaataggagtatggat
gtagctaaaaaacaaattcaacttcaacttcttcaggatgctgacgtagtttgcgcgact
ttgtctgctagtggtcatgaaacattgctaaatgctaacataagtttccctacggtaata
atagacgaagctgctcaagcagttgagcttagctcgcttattcctttaaaatatgaatgc
aaacgttgcattatggtcggtgatccaaaccaattaccaccaactgtgctctcgaaatct
gcttcaaaaaatggctatgatcaatcactttatgttcgtatgtttaaaaggaacccaagt
aatacttatcttttaagcatccaatatcgaatgcacccggaaatcagcaaatttcctagc
cattacttttaccaatcgaagctaattgatggaccaaatatggtttctgttgcagatcga
ccttggcatcacgacgctttgtttggtgtttatcgtttctttaatgtggttagcagagag
tctatatcaagatctaaatcgttgtacaacgcggatgaagcatcatttgtccttttatta
tatgagaaactttcacaaaacttcatcaatatagattttgaaggaaagattggtatcgtt
acaccttaccgaagtcaagttcaagaacttcgctaccaatttcaaaaaaaatttggatct
gtcatttttaaataccttgacatacatacagtagatggttttcaaggacaagaaaaagac
attattattttctcttgcgtcaggagctccatggggaatggtataggtttcttgcaagac
gtacgacgtctgaacgttgctttgactagagcaagatcttcattgtacattgtgggtagt
actgaacctttaatgcagaatgaagtttttcgcaacctaatagaggacgccaaaacaagg
aagtgctggatgcgtgttacgtttgaacagctgttgcattggaaatccgatacaaggaag
gcaaattcaaaatcgatcaaggagcataataatgagggtgatgacttaattagagagaaa
tcggatagcttaccacgaaatgagcgttcgccatcattaactccttatgcagaaccgaaa
caagagattattaacgcgcccacttcttcaggctcaaataatattgctaaagacaaggaa
ctaactcgacgtccgggcaatgtaaaaaaaccagatatgattaactcaatattgcccaag
gatccgtctaaggaaaagaaggaagataagaagcagaaagggaccgatgattcaagtatg
ccgcagaataaacgtgagcgcagttttggtgacccgactgatagtagaaagccaaaaaag
cccaaaggagagaaaaagcaggatgatgaccaaaaaacatctaaaaagtcgaagaaacca
aaatcgaagttggctttggcggctatggcccgaggttttcgtccaccgacttag
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