KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_02621
Entry
SOMG_02621        CDS       T09274                                 
Symbol
pim1
Name
(RefSeq) RCC1 family Ran GEF
  KO
K11493  regulator of chromosome condensation
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:som00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:som03019]
    SOMG_02621 (pim1)
   03036 Chromosome and associated proteins [BR:som03036]
    SOMG_02621 (pim1)
Messenger RNA biogenesis [BR:som03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     SOMG_02621 (pim1)
Chromosome and associated proteins [BR:som03036]
 Eukaryotic type
  Chromosome condensation proteins
   Other regulators of chromosome condensation
    SOMG_02621 (pim1)
SSDB
Motif
Pfam: RCC1 RCC1_2 DUF4213
Other DBs
NCBI-GeneID: 80876101
NCBI-ProteinID: XP_056038498
UniProt: A0AAF0AXN5
LinkDB
Position
2:join(249603..250202,250333..251385)
AA seq 550 aa
MSGTRVTRRSQRQQEATGNGMNKRELEDHEAPVSTKPSKKRVKVSSGPKPVRTTGKKLNS
IPSLSTELLDVFVFGTGSMNELGMGDLEVDVAYRPRLNPNLPRDKIGVVDLAVGGMHSAV
LSHDGRVFTWGVNDDFALGRATKNQTDKEGNTIDNDLLEGTPNQVTGAIERLKITKVCCS
DNLTVVVTENGSCFSWGTFRCSDGVLGFSASTKRAPEPVQMPLPEVAQVAAGTDHILALT
TTGKVYTWGNGQQCQLGRRMMDRRRLQGLKPEPLALKNIVAVGAGAYHSFAINSKGKVYA
WGLNMTKQCGIADEEDEEEGIVTKPTLVEALEPYKIKAITGGEHHTLALLEDGRVLAWGR
HDRHQLGIPDDALPESLTKDEKGYNYTVSNPTIVPGISNVVQICCGTHHSLAVTNDGKLY
SWGSSENYEVGQGDTDEEIQVPTLVRSKAIKTASVRVAGAGGQFSVAAGAPTELDTKPSE
DGVKTENEVKSEEKNVSISPKQETEESKPVTTESTEMHIDQQPPTTEDQTTIQSTEEKKE
FAEETESTST
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgtcaggaactagagtcactagaaggtcacagaggcaacaggaagctacggggaatggt
atgaataagcgcgagctggaagatcatgaagcgcctgtttcgaccaaaccttcgaaaaag
cgtgtcaaggtttccagcggtcctaaacccgtaaggactactggaaaaaaactgaacagt
attccctctctctctactgaactgttagacgtttttgtttttggtactggttccatgaat
gaactcggcatgggtgacttagaagtcgacgtcgcttatagacctcgccttaacccaaat
ttaccaagagacaagattggtgtcgttgatttggccgttggtggcatgcactcagctgta
ctttctcatgatggtcgcgttttcacatggggtgtcaacgacgactttgctttgggtcgt
gctacaaagaaccaaactgacaaagaaggaaacacaattgacaatgatttattagaagga
actcctaatcaggttactggtgctatcgagcgtttgaaaatcaccaaagtctgttgtagc
gataatcttacggttgtcgtcacagaaaatggcagctgcttcagttggggtacttttcgt
tgctctgatggtgttttagggttcagcgcatccacgaagcgtgccccagaacctgttcaa
atgcctcttcccgaagttgcgcaagttgctgctggcactgatcacattcttgccttgaca
acaacaggaaaagtttatacctggggaaatggtcagcaatgtcaactcggacgtcgcatg
atggatcgtcgtcgacttcaaggcttaaaaccggagcctcttgcccttaaaaacatagtg
gccgttggtgccggggcttaccattcctttgctataaatagcaagggaaaggtttatgca
tggggtttaaatatgacaaaacaatgcggcattgccgatgaagaagatgaagaagaaggt
attgttactaagcctactttagtagaggcactggaaccctacaaaataaaagctattaca
ggtggtgaacaccatacccttgcactattagaagatggacgagtattggcttggggtcgt
catgatcgccatcaacttggtatacccgatgatgcattacctgaatcccttaccaaagac
gaaaagggctacaactatactgtatctaaccctactattgtccctggaatctcgaatgtt
gttcaaatctgctgtggtacccaccatagtttggcagtaaccaatgatggtaaactctat
tcatggggatcatctgagaattatgaagttggacaaggtgacactgatgaagagattcaa
gtgcctacacttgttcgctctaaggctataaagacggctagtgtccgtgtcgcaggtgct
ggtggtcaattttccgtggccgctggtgctcctactgaattggatacgaaaccttctgaa
gacggagtaaagactgaaaacgaagtaaaatccgaagaaaagaatgtttctatttcccca
aagcaagaaactgaagaatcaaagcctgtcactactgagtccacggaaatgcatattgac
cagcaaccacctactaccgaagatcaaacaactatacagagtactgaagaaaaaaaggaa
tttgctgaagaaaccgaatctacgtctacttaa

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