Schizosaccharomyces osmophilus (fission yeast): SOMG_02703
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Entry
SOMG_02703 CDS
T09274
Name
(RefSeq) ATP-dependent RNA helicase, spliceosomal Dhx35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
som03041
]
SOMG_02703
Enzymes [BR:
som01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SOMG_02703
Spliceosome [BR:
som03041
]
Complex C
Other components
Complex C specific factors
SOMG_02703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_22
AAA_19
ABC_tran
ResIII
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
80876183
NCBI-ProteinID:
XP_056038350
UniProt:
A0AAE9WCX2
LinkDB
All DBs
Position
2:join(421638..421728,421779..421856,421906..421970,422023..422279,422323..423103,423150..423251,423307..423472,423513..423833,423874..423962)
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AA seq
649 aa
AA seq
DB search
MEDEFAIQSFKPALSTNLAFQKKLLPIFKYREPLLYAIETFQVTLLHGHTGCGKTTQLPQ
YLYETGWTKEGKIIGCTQPRRLVARSVATRVSEELNTEVGKACGYKIQFEHNVSDETKIE
YMTDGSLLKEILTDPLLQRFSVIMIDEVHERTVNIDLLLGILKRILLKRPDLRVILASAS
ANIQSLNDFFYERGKIDTKIISIEGKLFPVDVMYLENPTENYVNMAIETVLNINSSYPSG
DILVFLTDRREIDDCVKRIEALSITTPEDLPMLVPLPLYSGLTLDEQLRVFDIYEKRFRK
VIFSTNIAEASVTIDGIVYVVDCGLCKLRIFNPYSRITKLIRVPISKSNAVQRTGRAGRT
NPGKCFRLFPKNVYDSLKDESDAEISHADMLPVVLFLKAIGLRNIYQFPFYIPPPTIHII
AALEDLYFLGAIDDHSSLTDPIGFQMVELPLDARLSKALLSSASYDCTNAMLNIVSVVMA
GDVFYRPSSNHHEATACHATFITEEGDILTGLNVLESFLNRKKDMKWCKTNFLNYNTLSH
ASEIRKHILPYLQRFRISSEKRLTDADSSKMIECILQGFFRNVAHLQDDGSYKTISGSPV
WVDQKSTMNNKSIPWIMFTSMVQYEDRTFINGISKIESKWLEHFYNRRK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaattcgccattcagtcatttaaacctgctctcagtaccaatctagcattt
cagaaaaagctattaccaatatttaaatatcgagaaccacttttgtatgccattgagacc
ttccaagtcacgctcttgcatgggcacactggatgtggaaagacaactcaactgcctcag
tatttgtacgaaactggctggacgaaagaaggaaaaataattgggtgtacacagccgaga
agattggttgctagaagtgttgcaactcgcgtctcagaagaactgaatacagaagttggg
aaagcgtgtgggtataagattcagtttgagcacaatgtatccgatgagacgaaaattgag
tatatgactgatggcagtctgctaaaagaaatccttacggaccctcttttacagcgcttt
tcggttattatgatcgacgaagtacacgagcgaactgttaatatagaccttctcttggga
atactgaaaaggattcttttaaagcgccctgatttgagagtgatccttgctagtgcttcc
gcgaacatacagagtttaaatgattttttttacgaaagaggtaaaattgatacgaaaatt
atttcaattgaagggaagttatttcccgtcgatgtgatgtaccttgaaaatcctacggaa
aactatgtgaacatggcaattgagacggtgttgaatataaattcctcgtatccttcaggc
gatattttggtatttctcacagatcgaagagagattgatgattgtgtaaaacgtattgag
gctttgtctataacaacgccagaggacttgccaatgcttgtaccattgcctttgtattcg
ggtctaacattggacgagcagttacgtgtttttgacatctacgaaaagagatttagaaaa
gttattttttctacaaacattgctgaagcaagtgtgaccattgatggaattgtttatgtt
gtagactgtggcttgtgcaagctccgaatctttaatccttacagcagaattacaaaacta
attcgcgttccgatttcaaaatctaatgcagttcaaagaactggaagggcaggaaggacc
aatcctggaaaatgttttcggttgttccccaagaatgtctatgattccttaaaagatgaa
agcgatgctgaaataagtcatgctgatatgttgccagttgtgttgttcctaaaagcgatt
ggtttaagaaacatataccaatttccattttatattccccctccgacaatacatatcatt
gcggctttagaggatttgtactttttaggagctatcgatgatcactcaagtttaaccgac
cctattgggttccaaatggtggagttgcccttagatgcaagattatcaaaagcgctcctc
tcgtctgctagttatgactgtactaatgcaatgttaaatattgtatctgttgtgatggca
ggggatgtcttctatcgtccttctagtaatcaccacgaagctactgcttgtcatgcaaca
tttattactgaagaaggtgatattctaactggtttaaatgtcttggaatcgtttttaaat
cgaaagaaagatatgaaatggtgcaagacaaatttcttgaattataatactttgagtcat
gctagtgagattcgaaagcacatccttccctacttgcaacgctttcgcatttcttcagaa
aagaggttgacagatgcggattcctcaaaaatgatagaatgtattttacaaggattcttt
cggaatgtggcacatttacaggatgacggatcttataaaacaatctcaggatcaccagtt
tgggttgatcagaaaagtacaatgaacaacaaaagcataccttggattatgtttacttca
atggttcaatatgaagatcgaacatttattaatgggatttcaaaaattgaaagtaaatgg
ttagagcatttttataatagaagaaaataa
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