KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_02709
Entry
SOMG_02709        CDS       T09274                                 
Symbol
pnk1
Name
(RefSeq) DNA kinase/phosphatase Pnk1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:som00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SOMG_02709 (pnk1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:som01009]
    SOMG_02709 (pnk1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:som03400]
    SOMG_02709 (pnk1)
Enzymes [BR:som01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     SOMG_02709 (pnk1)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     SOMG_02709 (pnk1)
Protein phosphatases and associated proteins [BR:som01009]
 HAD phosphatases
  Other HAD phosphatases
   SOMG_02709 (pnk1)
DNA repair and recombination proteins [BR:som03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     SOMG_02709 (pnk1)
SSDB
Motif
Pfam: PNK3P AAA_33 KTI12 Hydrolase HAD_PNKP Hydrolase_6 LNS2 AAA_18 AAA_22 nSTAND3 AAA_16 MMR_HSR1 AAA_25
Other DBs
NCBI-GeneID: 80876189
NCBI-ProteinID: XP_056038342
LinkDB
Position
2:complement(join(434112..434258,434319..434461,434503..434898,434949..435453))
AA seq 396 aa
MGKRKVAPQPSINSYLNSSENKKHRGEDLSSTDSKLTWEISESLYIATYGTPKKSSKVAT
FDLDGTLIKTKSGRVFAKDGGDWLWWHPNVVPTLKKLDSEGYSIVIFSNQNGIPRRASTG
HQFQIKVQAILESLDLPVIMYAALLRDKYRKPLQGMWDHFVERWDHPIEKSLAFFVGDAA
GRPRNHNSTDLKFAENIGIKFDTPEHYFTGEHFDRPDFSSFHPERFLQKHRSSQPYKFVP
AEHQEIVVLVGYPASGKSTLCQDQIVPFGYERINQDTLKTRARCLKAAAKALENKKSVVV
DNTNPTIEAREVWVGLAKKFNVPARCVYVEVPELLAKHNNTFRYIQQEIKGLPEVAYVSY
RSRFQKPSTEEGFQNVELVPFVCLPELEDKWNQWYE
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgggaaaacgaaaggtagcacctcaaccgtccatcaactcttatctcaattcctctgag
aataaaaaacatagaggtgaagatttgtcttcgacagatagtaaattgacctgggagatt
tcagaatccttgtacatagcgacatatggaacgcccaagaaatcttcgaaagtcgcaacc
tttgatttggatgggaccttaataaaaacaaagtcaggtcgagtttttgctaaagacgga
ggagattggctttggtggcatcctaatgtcgttccaactttaaaaaagctggattctgaa
ggttactctattgtcattttcagtaatcagaatggaattcccagacgcgcatcaacaggt
caccagtttcaaataaaagttcaagctattctagaatcactggatctcccagtcattatg
tatgctgccttgttgagagacaagtatcgcaagcctttacaaggaatgtgggatcacttt
gtagaaagatgggatcacccaatagaaaaatcccttgccttttttgtcggcgatgccgca
ggacgtccccgtaatcataactctactgatctaaaatttgccgagaacattggtataaaa
ttcgatacacctgagcattatttcactggagagcactttgatcgcccagatttttcttca
tttcatccagaaaggtttcttcaaaaacatagaagctcccaaccttataaatttgtacca
gcagaacaccaagaaattgtagtccttgttggctatccagcttccggtaaaagtactctt
tgtcaagatcagatcgtaccatttggatacgaacgaattaaccaagataccctaaaaact
agagcgcgttgtctcaaagcagcagcgaaagcattagaaaacaagaaatccgttgttgtt
gacaatacaaatcctaccattgaagctagagaagtttgggttggactagctaaaaaattt
aatgttcctgcacgttgtgtttacgtagaagtacccgaactattggctaaacacaataac
accttcagatatattcagcaagagattaaaggcctaccagaagtggcgtacgtatcatat
cgctcaagatttcagaagccaagcactgaggaaggttttcaaaacgtggaacttgttcca
tttgtgtgtcttccggaattagaagataaatggaatcagtggtatgaatga

DBGET integrated database retrieval system