Schizosaccharomyces osmophilus (fission yeast): SOMG_02742
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Entry
SOMG_02742 CDS
T09274
Symbol
shm2
Name
(RefSeq) serine hydroxymethyltransferase Shm2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som00260
Glycine, serine and threonine metabolism
som00460
Cyanoamino acid metabolism
som00630
Glyoxylate and dicarboxylate metabolism
som00670
One carbon pool by folate
som00680
Methane metabolism
som01100
Metabolic pathways
som01110
Biosynthesis of secondary metabolites
som01200
Carbon metabolism
som01230
Biosynthesis of amino acids
som01240
Biosynthesis of cofactors
som04981
Folate transport and metabolism
Module
som_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
som00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SOMG_02742 (shm2)
09102 Energy metabolism
00680 Methane metabolism
SOMG_02742 (shm2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SOMG_02742 (shm2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SOMG_02742 (shm2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SOMG_02742 (shm2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SOMG_02742 (shm2)
Enzymes [BR:
som01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SOMG_02742 (shm2)
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GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Rad26-like_N
Motif
Other DBs
NCBI-GeneID:
80876222
NCBI-ProteinID:
XP_056038868
UniProt:
A0AAE9WE84
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Position
2:complement(join(506719..508101,508228..508314))
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AA seq
489 aa
AA seq
DB search
MALTRQIPRRTGISLVFKRFYALPSEQKKLLQSSVFQYDPEVGKILKFEEKRQKESIGLI
ASENFTSKAVMDVLGSVMQNKYSEGYPGARYYGGNEIIDQAESLCQKRALEAFHLNPELW
GVNVQPHSGSPANLQAYQAVMKPHDRLMGLDLPHGGHLSHGFATPQKSISAVSTYFCTMP
YGVNPETGIIDYDGLSRSAKQFRPKVIVAGASAYSRLIDYKRMREIADECNAYLLCDMAH
ISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRRGLCKHDKKGNPVYYELEDKI
NFSVFPGHQGGPHNHTITALAVALGQAKTPEFIEYQKNVVKNAKAMADAFIKKGYKLVSG
GTETHLVLVDLTNKDIDGARVERVLELINISANKNTVPGDKSALIPHGLRIGTPACTTRG
FNEQDFVRIVDLIDEVVHLTVKLNKQAKDNGKTKLKEFKSYVGDGSQNPEIFKLKEQVRQ
WASKFDFPI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcattgacacgacagattcctagaagaacaggaatcagtttggttttcaagcgtttt
tacgctttaccaagcgagcaaaaaaagcttcttcaatcttcggtttttcaatatgaccct
gaggttggcaaaatcttaaaatttgaagagaaacgacaaaaggagtcgataggtttaatt
gccagtgaaaactttacttccaaggccgttatggacgtccttggtagtgtgatgcaaaat
aagtatagtgaaggttacccaggagccagatattatggaggtaatgaaattatcgatcag
gccgagtctttatgtcaaaagcgtgcccttgaagcttttcatttaaatccggaattatgg
ggtgttaatgtacaacctcattcaggttcgcctgctaaccttcaagcttatcaagctgtt
atgaaaccccatgatcgtttgatgggtttggatttgcctcatggagggcacttatctcat
ggatttgctacacctcagaaatcaatttccgcagtctccacatatttctgtactatgccg
tatggtgtgaatcccgaaactggtattattgattatgacggcttgagcagatctgctaag
cagttccgtcccaaggtgattgttgcaggtgcaagtgcgtattcacgtttaattgattat
aaacgcatgcgtgaaattgccgatgagtgtaatgcttatttgctttgtgatatggctcat
atatctggtcttgttgccgccggtgtcattccttctccgtttgaatatgccgatattgtt
actaccacaacccataagtctcttcgtggacctcgaggagctatgattttcttccgtcgt
ggtctttgcaaacacgacaagaaaggcaaccctgtttattatgaattggaagacaaaatt
aatttttcagtctttcctggtcaccagggtggtcctcataatcacacaattaccgctttg
gctgtagccttaggtcaagcaaaaactcctgagtttattgaatatcaaaagaatgttgtc
aagaatgctaaagcaatggcagatgcatttatcaaaaaaggctacaaattggtttccggt
ggtacagaaacccatttagttcttgtcgatttgaccaacaaagatatcgacggagctagg
gttgagcgtgttttggagttgatcaatatctcagctaataagaacactgttcctggagac
aagtctgcacttattccccatggtttgcgtataggtactccagcttgtactacacggggc
tttaatgaacaagattttgtaagaattgttgaccttattgacgaagttgttcacctaact
gtcaagttgaacaaacaagctaaggataatggtaagaccaaactcaaagaatttaaaagc
tatgttggtgacggaagtcaaaatccagaaatattcaagttgaaagaacaagttcgtcaa
tgggctagcaagtttgactttcctatttaa
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