Schizosaccharomyces osmophilus (fission yeast): SOMG_02883
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Entry
SOMG_02883 CDS
T09274
Symbol
srp2
Name
(RefSeq) splicing factor Srp2
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_02883 (srp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
som03041
]
SOMG_02883 (srp2)
Spliceosome [BR:
som03041
]
Common components
Common spliceosomal components
SR proteins
SOMG_02883 (srp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
80876363
NCBI-ProteinID:
XP_056038721
UniProt:
A0AAF0AY65
LinkDB
All DBs
Position
2:join(797363..797405,797450..797672,797863..797932,797986..798059,798114..798213,798264..798866)
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AA seq
370 aa
AA seq
DB search
MSETRLFIGRIPPQAVREDVEDFFKGYGQILDCKVMNGFGFVELEDARDARDIVNDFQGK
EFMGSQIVVEPARGERKRRENFRETAAAKYPRPRRTGYRLIVENLSEEVSWQDLKDVMRQ
AGEPTFTDAHRQNLGFGVVEFSTEDDMRNALTNLNGEEIKGTAIALREDPNAPNEPLPEG
PGFRSRSPPPRRRFPMDNRRGGFARRDTYRPVRDDTYRPVRDDDHRPARDDDRRYIPRGG
ARDSFRRGGRDDFRGRDDFRGRDDFRRGPRRDDYRRPRADEYRPRRDDSYRPRRDDYPAR
DEEYGRDAYERSPSPRRERSRSPRYADEYSSYPPAPASEMQQSNDAPSYPGEPANSVPAE
AGEGQVAAEW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaactagattgtttatagggcgtattccccctcaagctgttcgtgaggacgtg
gaggacttcttcaaaggctatggccaaatccttgactgcaaagttatgaatggttttgga
ttcgttgagcttgaagatgctcgtgatgctcgggatatagtgaatgactttcaaggaaaa
gagtttatgggcagtcaaatagttgtagaacctgctcgtggtgaaagaaaaagaagagaa
aatttccgtgaaactgctgctgctaaataccctcgtccacgtcgcactggctatcgttta
attgttgaaaacttatctgaagaagttagctggcaggacttgaaagatgtaatgagacaa
gccggtgaaccaacatttactgatgctcatcgtcaaaatcttggttttggtgtcgttgaa
ttctcgactgaagatgatatgagaaatgctctcacaaacctcaatggtgaagaaattaag
ggtaccgcaattgctttgcgtgaagatcctaatgctcccaatgaacctcttcccgaaggc
ccaggtttccgctctaggtctccacctcctcgtcgtcgtttccctatggacaaccgtaga
ggaggatttgctcgtcgtgatacctatcgccctgtcagagatgatacctatcgccctgtc
agagatgatgatcatcgccctgccagagatgatgatcgtcgctatatccccagaggtggc
gctcgtgacagttttcgtcgtggaggacgtgatgattttagaggacgtgatgacttcaga
ggacgcgatgatttcagacgcggccctcgccgtgacgattaccgcagacccagagccgat
gaatatcgtcctcgtcgtgatgattcctaccgtcctcgtcgtgatgattatcctgcccgt
gatgaagaatatggtcgtgatgcttatgaacgtagtccttctccccgccgtgaacgtagc
cgttctcccagatacgcggacgagtacagttcatacccacctgcacccgcttctgaaatg
cagcaatctaatgacgctccaagctatcctggggaacctgctaactccgtccctgctgaa
gctggcgaaggtcaagttgctgctgaatggtaa
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