Schizosaccharomyces osmophilus (fission yeast): SOMG_02887
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Entry
SOMG_02887 CDS
T09274
Symbol
tbp1
Name
(RefSeq) TATA-binding protein (TBP)
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SOMG_02887 (tbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
som03000
]
SOMG_02887 (tbp1)
03021 Transcription machinery [BR:
som03021
]
SOMG_02887 (tbp1)
Transcription factors [BR:
som03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
SOMG_02887 (tbp1)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SOMG_02887 (tbp1)
RNA polymerase III system
TFIIIB
SOMG_02887 (tbp1)
RNA polymerase I system
SL1/TIF-1B
SOMG_02887 (tbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
80876367
NCBI-ProteinID:
XP_056037979
UniProt:
A0AAE9WCD5
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All DBs
Position
2:complement(join(808263..808433,808490..808811,809066..809274))
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AA seq
233 aa
AA seq
DB search
MDFALPTTASQASAFMNNSSLAFPVLPANNNNNETVDDTADSGEAEVAKTEGVSGIVPTL
QNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIFASGKMVVLGGK
SEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRLEGLAYSHGTFSSYEP
ELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYQAFEAIYPVLSEFRKH
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggattttgctttacccaccacggcctcccaagcgagtgcttttatgaacaattcttct
ttagcgttccctgttttaccagctaataataataacaacgagacggttgatgacacggca
gattccggtgaggcagaagtagcgaagactgaaggtgtttctggaattgttccaaccctt
cagaacattgttgctactgttaacttagactgtcgtcttgatctcaaaactattgccctt
catgcacgtaatgcagaatataatcctaagcgtttcgcagctgttattatgcgtattcgt
gagcccaagtcgactgctttgatctttgcttcaggtaaaatggttgttttaggtggtaaa
tccgaagatgactctaaattggcatctcggaaatacgctcgtatcattcaaaagctcggg
ttcaacgccaaatttaccgactttaagattcaaaatattgttggcagttgtgatgtgaag
tttccaatccgtttagaaggcttggcatattctcacggaactttctcatcttatgagcct
gaattgtttcctggtctgatttatcgtatggttaagcccaaagtggttttactgattttc
gtatccggtaaaatcgtcttaacgggtgccaaggtacgagaggaaatttaccaagctttt
gaagctatctaccctgtattatcggaattccgcaagcactaa
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