Schizosaccharomyces osmophilus (fission yeast): SOMG_03029
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Entry
SOMG_03029 CDS
T09274
Symbol
pwi1
Name
(RefSeq) splicing coactivator Srm160
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013
Nucleocytoplasmic transport
som03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SOMG_03029 (pwi1)
03015 mRNA surveillance pathway
SOMG_03029 (pwi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_03029 (pwi1)
03041 Spliceosome [BR:
som03041
]
SOMG_03029 (pwi1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SOMG_03029 (pwi1)
Spliceosome [BR:
som03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
SOMG_03029 (pwi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
80876509
NCBI-ProteinID:
XP_056038804
UniProt:
A0AAE9WDU8
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All DBs
Position
2:complement(join(1127692..1128126,1128168..1128497,1128574..1128663,1128709..1128726))
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AA seq
290 aa
AA seq
DB search
MSGFYKGVGAEQETLYTSADKKLMRNTRFPPSFGTKVDMKKINIEVLKPWIANRLIELIG
FEDEVVIDFVYSMLEEAVEASKNTDSHNESALDPKKVQINLTGFLESKAPEFTEGLWLLI
LSASQNPYGIPEKFIQEKKEELSKLRSQRDVSESEARKEIDRSLHPTEERTSREDRQWDT
RERSKVRHRREPQRFPRREIRERSSYERERSPRRHHKSRHEADPHERPYAGRSSSRSYRS
SHHPAGAHKRHDEFDEFGRSRPERRDSDYYSKRHRSRSPYEGEEERFSER
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttttacaaaggcgttggtgctgaacaagaaacgttatatactagtgctgac
aagaaattgatgcgaaacacgagatttccacctagctttggtacaaaggtggatatgaaa
aaaataaatattgaggtactaaagccctggatagctaatcggttaatcgagcttatagga
tttgaagatgaggtagtgattgatttcgtgtatagcatgctagaagaggctgttgaggca
tcgaaaaacaccgattcccataatgagtctgctttagatcctaaaaaagttcaaataaat
ctcacggggtttttggaaagcaaggcgcctgaatttacggaagggctatggttattaata
ttatcggcttctcagaatccttatgggattcctgaaaagttcatccaggaaaagaaagaa
gaactttctaaacttcggagccaaagagacgtttcggaatctgaagccagaaaagagatt
gatcgctctttacatccaaccgaagagcgtacttccagagaagatcgacagtgggatact
agagaacggtctaaagtgcgacatagacgagaacctcaaaggtttccacgaagagaaatt
cgcgaaagatcatcctacgagagagaaaggtcaccacgtcgacaccataaaagcaggcat
gaggctgacccccatgagcgtccctatgcaggccgcagtagttcacgaagctatcgttct
tctcatcatccagcgggtgctcataaaagacatgatgagtttgatgagttcggaagatca
agacctgaaaggcgggactctgactactattccaagagacaccgtagtcgttcaccttat
gagggtgaagaagaaaggttttctgagagataa
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