Schizosaccharomyces osmophilus (fission yeast): SOMG_03128
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Entry
SOMG_03128 CDS
T09274
Symbol
sme1
Name
(RefSeq) Sm snRNP core protein Sme1
KO
K11097
small nuclear ribonucleoprotein E
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_03128 (sme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_03128 (sme1)
03041 Spliceosome [BR:
som03041
]
SOMG_03128 (sme1)
03032 DNA replication proteins [BR:
som03032
]
SOMG_03128 (sme1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
SOMG_03128 (sme1)
Spliceosome [BR:
som03041
]
Complex A
U1 snRNP components
Sm proteins
SOMG_03128 (sme1)
U2 snRNP components
SOMG_03128 (sme1)
Complex B
U1 snRNP components
SOMG_03128 (sme1)
U4/U6.U5 tri-snRNP components
SOMG_03128 (sme1)
Complex C
U2 snRNP components
SOMG_03128 (sme1)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
SOMG_03128 (sme1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
80876608
NCBI-ProteinID:
XP_056037564
UniProt:
A0AAF0AV82
LinkDB
All DBs
Position
2:complement(join(1389962..1390011,1390308..1390383,1390497..1390586,1390634..1390672))
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AA seq
84 aa
AA seq
DB search
MSGRVQKVMIPPINFVFKLLQQHTPVEIWLFEQVDLRIEGQIRGFDEFMNIILDDAVQID
TKQNRREIGRILLKGDNITLIRAI
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacgtgttcaaaaggttatgattccccctattaattttgtattcaagttatta
cagcaacatactccagtagaaatatggctttttgaacaagtagacttacgaattgaagga
caaattcggggattcgatgaatttatgaatattattttagatgatgctgttcaaattgat
acaaaacagaatcgacgtgaaataggtcgaattttactcaaaggtgacaatattacactt
attcgagcaatctaa
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