Schizosaccharomyces osmophilus (fission yeast): SOMG_03136
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Entry
SOMG_03136 CDS
T09274
Symbol
ubp4
Name
(RefSeq) ubiquitin C-terminal hydrolase Ubp4
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SOMG_03136 (ubp4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
som01002
]
SOMG_03136 (ubp4)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_03136 (ubp4)
04121 Ubiquitin system [BR:
som04121
]
SOMG_03136 (ubp4)
Enzymes [BR:
som01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
SOMG_03136 (ubp4)
Peptidases and inhibitors [BR:
som01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
SOMG_03136 (ubp4)
Membrane trafficking [BR:
som04131
]
Endosome - Lysosome transport
Others
Others
SOMG_03136 (ubp4)
Ubiquitin system [BR:
som04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
SOMG_03136 (ubp4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
80876616
NCBI-ProteinID:
XP_056037443
UniProt:
A0AAE9WBK7
LinkDB
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Position
2:complement(join(1407538..1409037,1409169..1409312,1409353..1409460))
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AA seq
583 aa
AA seq
DB search
MSDEYFDKLFDKAFVYIHDDETVQSCTFRGLQWLGEAKNLEEKGLYVKSYVFYLKAIKLA
YEIPCRFEISVQAGAYSDFKHFQKQTLALIQKIFKLKNKLAVRHFLPCMSIQSAMKLTKD
KSSKALFINVYSEESSKDYFLSEATINIPVSLFRSTSITEIDDYLKKAPFLPEVAVCYSL
ENHLDDIDIAYHIYSVLTSLKWKPQFLTSMSSKKIDENKSILEYLPIGLTNLGNTCYMNC
VLQCLFACGELISPMCHKSQALGAINTGNPLGSGGKMTLAFLSLVNEVFQRKGKRVVSPK
RFLDAVQSLNRDFSIDDQCDAQEFLNYLLDKIHEDLNSNASRASMSPLSDAQQSAREKLP
LSYLNYVEWNLHIRHNLSIVEQIFSGQLCSRIQCTVCQRTSTTFAPFTSLAIPIPDVPGF
VSLHECLRRFMAYEVLEGHNAWFCPACQRRRPAKKIMNISHLSDYLIIQIQRFRNTMIGW
KKVDTPLQLNFRIPSNMLIPPCFQSGMNYDQCSYDLFAFVSHYGQLENGHYTSCVLSENQ
WYRIDDSIVQRVDGFAALQYDFSSSYILFYKKKEGVSELEKRS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgagtattttgataaactatttgacaaagctttcgtttacattcacgatgat
gaaaccgtacagagctgtacatttcgcggactgcaatggctgggagaggctaaaaattta
gaagaaaagggcttatatgttaagtcttatgtgttctatctgaaagccatcaaattggct
tatgagattccatgccggttcgaaatctcagttcaagccggtgcttattcagatttcaag
cactttcaaaagcaaacgcttgctctcattcagaaaatatttaaattaaaaaataaatta
gcagtgaggcattttctgccttgcatgtcgatccagtcagccatgaaactgactaaagat
aaatcaagtaaagccttatttatcaatgtgtactctgaggaaagttccaaggattatttc
ctttctgaagctaccataaatattcccgtttcactgtttcgttcgacatccataactgaa
attgatgattatttaaaaaaggccccttttcttccagaggttgcagtttgttatagctta
gaaaaccatttggatgacatagatattgcttatcatatttactctgttctgacgtccctg
aaatggaaaccgcagttccttacttccatgtcaagcaagaagattgatgaaaataaaagc
attctcgaatacttacccattggtctcactaatcttggaaatacgtgttatatgaactgc
gtcttgcaatgccttttcgcatgtggggagctaatttccccaatgtgtcataaatcgcag
gctcttggagccattaatactggtaatccattgggatccggtggaaaaatgacattagct
ttcctttctttggtaaacgaagtttttcaaagaaagggaaaacgagttgtttctccaaaa
cgatttctagatgctgttcaatccctgaacagagattttagtattgacgaccaatgcgat
gctcaagaatttctgaactatttgctagataaaatacatgaagacttaaactctaatgct
tctcgtgcttcaatgtctcctctttctgatgcgcagcaaagcgcccgagaaaaattacct
ctttcttatcttaattatgttgaatggaatcttcatattcgacataatctaagtatagtt
gagcaaattttttcagggcaactttgcagtcgaatacaatgtacggtttgtcaacgaacg
tctactacattcgcgcctttcacttctcttgctattccgattccagatgtacccggattc
gttagcttgcatgaatgtctccgcagattcatggcttatgaagttttagaaggacataat
gcttggttttgtcctgcgtgtcaaagacgaaggccagcaaaaaaaataatgaatatatcc
catctttctgattacttgataatacagatacaaaggtttcgtaatacgatgataggctgg
aaaaaagtcgatactcctctacaactgaactttcgaattcccagcaacatgcttattcct
ccttgtttccaatcaggaatgaattacgatcaatgtagctacgatttatttgcttttgtg
agtcattacggccaacttgaaaacggtcactatacatcgtgcgttttaagtgaaaatcag
tggtatcgaattgacgattccatcgttcaaagagtggatggctttgcagcgcttcagtat
gatttttcttcttcatatatattgttttacaaaaagaaagaaggtgtgagtgaattggaa
aaacgaagctga
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