Schizosaccharomyces osmophilus (fission yeast): SOMG_03236
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Entry
SOMG_03236 CDS
T09274
Symbol
pst1
Name
(RefSeq) Clr6 histone deacetylase complex subunit Pst1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
som00001
]
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
SOMG_03236 (pst1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_03236 (pst1)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
SOMG_03236 (pst1)
REST complex
SOMG_03236 (pst1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
SOMG_03236 (pst1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
80876716
NCBI-ProteinID:
XP_056038022
UniProt:
A0AAE9WDT3
LinkDB
All DBs
Position
2:join(1607865..1607994,1608128..1608680,1608766..1612639)
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AA seq
1518 aa
AA seq
DB search
MAKDWQDAHLGQCQRIEDYPNVAINYPGSYVTPSGTMAYHPTNTPFYAQVPTHTSPQGTL
YPVYNSVSPVYDPTTGRVLYRNIGPSPTASIPPARHGLAVYGPSPHLQAHPAPSTHPGEA
APSTAAAGSQVKTNGDYPSQAMMAPSGESNNVSRPTNARSSVSPFVTNQKIPLASGPSSQ
PPPANNEFRQLNVTDALSYLDLVKLQFHHEPEVYNEFLDIMKEFKSQAIETPEVITRVSA
LFSGYPALIQGFNTFLPPGYGIELGPSEFGKPPAVHITTPQGPLVIADWNRPHATAQVPS
GYQKPAPYQPANSQPAVPSPGVIPPSAQSSTFAPYKSSPSPMPPSFPSVDASVKQAADLD
HAIHFVNNVKNRFSHKPEAYNAFLDILKSYQHDQRPIQLVYYQVSQLFAEAPDLLEEFKR
FLPDVSLKATSENQEKPAAAISEPAAQASKASPATTTSSLPPIGKFAPPAPVKPPQQTEK
RRVEPAVYTRSHAKRTRTATQAAEEYSPRAFNVPIAQNKNPTELAFLDAVRQYLVNESKY
NEFIKLLELYSQEVFDKNALVERCQTFLHESEHLMNWLKDLVKWDSNDCIPVPRPRVDLT
QCKGYGPSYRLLPKIELLLPCSGRDDVCWTILNDAWVSHPTLASEDSGFIAHRKNQFEES
LHRLEEERYKYDRHIGANVRAIELLEMNFRKMQKLTENEKESWTLPVGLGGKSPSIYQKV
IRKVYGKEAAQEIIENLQKHPAITIPIVLNRLKQTDREWRGLQKHWNELWHDIEERNFYR
SLDHQGITFKSTDKKNTTPKFLIGELRNLSKQQKNETEEGKTAPSYQYLFEYKDKSIVLD
MARLFGVFLVHVSTHSIEDREKLSIFLRSFLSIFFDIPYESFEQFLPSHFNDDDSETESQ
VSSLDKTRRSNTPTSHGVNNGLGLLKDIFKKSQKGPRESRSVKSESAPESTEETPEPNEV
DEYSVDAEEPNDLTATSIFSSGEVWVNCRFTDSDGALLDDGTKLSDRNVFNLFGNMGLYC
FFRLFHILYTRLEHLKGLEEKAYQKQHGIKPNPVALELGLIRDPSERLGFTLPHSDTVYG
QALGLCERIIEGEIDQNGFEDALRCLYGIHGFRMYTVEKIIGSLMKQLHTITSNRRIAQV
FMFFERDRVQRKTSPRQQIMYRVQTETVLGPDEDLCCIDWNSETQQSAIRLMGREDLTMA
NPKTDAEKWCYYIGSYIMSSPTEGILPEQVRVPFLHRNLPIDDVNEEDENNYVVRNAHAI
LTNFLRSGLALTIPINTVKIVYEPNTEDVFARNSKLVYTGSYTKIKSYRLSRWREWLESE
DGWSRGLTKEKSKKIKSTSLDTLFAETNSRAWKQEQMTLSEGKGKNGLNTATGNGKKSGY
RARGAKSNVNAEPQREKPEVDLNDDNTSEETSQIDGEDDANTQDEDEAELSKGHQRGKKY
DEDNNEIADKMYTKEKSPKENVEDEQKNQETYKQSANTSATNLNKLDADMEDDKTDMEEQ
ADESFDGDNTMEDDLLKE
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagactggcaagatgcgcatttgggtcaatgtcagcggattgaagattatcca
aatgtagccattaattacccaggatcgtatgtaactccttccggaaccatggcatatcat
cctacgaatactcccttctatgctcaagtacctacccataccagtccccaaggtactcta
tacccagtttataattctgtaagcccagtatacgaccctactactgggcgtgttctctat
cgaaacataggaccttctccgaccgcttcaatacctcccgctcgccatgggttggctgtt
tatggtccatcgccgcatttgcaagctcatcctgctccttctacccatccaggcgaagct
gctccgtctactgcagcagccggaagtcaagtgaaaactaacggtgattatccatcacaa
gctatgatggctccttcaggagaatctaacaacgtctctcgccctacaaacgcacgatca
tctgtttctccttttgttaccaatcaaaaaattcctcttgcatccggcccttcaagtcaa
ccaccaccggccaacaatgagtttaggcaattaaatgtaaccgatgctttatcctatctg
gacctggtaaagttacaattccaccacgaacctgaagtttataatgaatttcttgatatc
atgaaagagttcaaatcgcaggcgattgaaactcctgaggtcattacccgagtatctgct
ttattttctggttatcccgcattgattcaaggatttaatacattcctaccacctgggtat
ggtattgagctcggtccttctgaatttgggaaacccccggccgtacatatcacaacacca
caagggccgctggtaatcgcagattggaatcgtcctcatgctactgcccaagtgccttcg
ggttatcaaaaaccagctccttaccaaccagcgaattcacagcccgctgtcccatcccct
ggtgtaattcccccttctgctcaatcctctacttttgctccatacaagtcctctccttct
ccgatgcctccttcatttccctctgtagatgcatctgtgaagcaagccgccgatctggac
catgctattcattttgtaaataacgtgaaaaataggttttcccacaaacctgaagcttac
aatgcttttttggacatactgaagtcatatcagcatgaccagcgtcctatacaactcgtt
tattatcaagtttcccaattatttgcagaggcccctgacttattagaagagtttaaacga
tttttgccagatgtttctcttaaagctacttcagaaaaccaggagaagcctgctgctgcc
atctccgaacctgcagcgcaagcttctaaagcttctcctgccactacaacttcctctctc
cctccaattggaaagtttgctcctccagctcccgtaaagccacctcaacagactgagaaa
cgccgtgttgagccagccgtatataccagaagccacgcaaagcgtacgagaacggcaacc
caagctgccgaagaatatagtccaagagctttcaatgtcccaattgctcaaaacaaaaac
ccgacagagcttgcttttcttgatgcggtacgtcaatatttggttaacgagtccaagtat
aatgagtttattaagctccttgagttatactctcaagaagtattcgataaaaatgctctg
gttgaacgttgccagacattcctccatgaaagtgagcatttaatgaattggctcaaagac
ttagttaagtgggattctaatgattgtattcctgttccaagacctagagttgacttaaca
caatgtaaaggttatggcccaagctatcgtctgcttcccaaaattgagttattattgcct
tgttcaggaagagacgatgtatgttggactatcctaaatgatgcttgggtgagccatcca
actttggcatccgaagactcaggttttatcgcccatcgaaaaaaccagtttgaggaatct
ttacacagattagaagaggaaaggtataaatatgatcgtcacattggtgcaaacgtgaga
gctattgaacttcttgaaatgaacttccgaaaaatgcaaaagttaaccgagaacgaaaaa
gaaagttggactctacctgttggtcttggcggtaagtctcctagtatttatcaaaaagtc
atacggaaggtctatggaaaagaggcagcacaagaaattattgaaaacctacaaaaacat
cctgccatcactattccaatcgtgcttaatcgattaaaacaaactgaccgcgaatggaga
ggtttgcaaaagcattggaatgagctttggcacgatattgaagaaaggaacttctatcgt
agccttgatcatcaaggtatcactttcaaatctactgacaagaagaacactactcctaaa
tttttgattggagagcttcgaaatttatcgaaacagcaaaaaaatgaaacagaggaaggg
aaaacagccccatcctatcaatatctttttgagtacaaggataagtcaattgttcttgat
atggctcgattatttggtgttttcttggtccatgtttcaacacattctatcgaagaccga
gaaaaactttctatttttttacgttcgttcttatcaattttctttgacatcccatatgaa
tcatttgaacagttcttacctagtcatttcaatgatgatgattcagaaacagaatcacaa
gtgagtagtcttgataagactagacgttcaaatactccaacgtctcatggcgtcaacaat
ggcttggggctattgaaggatattttcaaaaagtcacaaaagggccctcgggaaagcaga
agcgtaaaatcagagtctgcacctgaatccactgaagaaacccccgagccaaatgaagtg
gatgaatattctgttgatgctgaagagcctaatgatttaacagctacgtctattttttcc
agtggtgaagtttgggttaattgtagatttaccgattcagatggagccttgttggatgac
ggaactaagttatctgatcgtaatgttttcaatctatttgggaatatgggactttattgt
ttttttagactatttcatattttatatacccgattagaacatttgaaaggacttgaggaa
aaagcatatcaaaaacaacacggtattaagcccaaccctgttgcacttgaattaggactt
atccgagatccttccgagcgcttgggattcacgcttcctcattctgataccgtttacggt
caagctttaggactatgcgagcgtataattgaaggagaaatagatcaaaatgggtttgaa
gatgccttgcggtgtttatatggaatacacggattcaggatgtacaccgttgagaaaatt
attggctccttgatgaaacaactgcatacaataactagcaaccgtcggatagcacaagta
ttcatgtttttcgaaagggatcgggtacagcgaaaaactagtcctcggcagcaaattatg
tatcgtgtacaaacagagactgtgcttggacctgatgaagacttgtgttgtatagactgg
aattcggaaactcagcaatcggctattcgccttatgggaagagaagacttaactatggca
aatccaaagaccgatgcagagaaatggtgctattatattggtagctatataatgtccagt
ccaaccgagggaattttgccagaacaagttcgagtcccttttttgcatcgaaacttacca
attgatgatgttaacgaagaggatgagaataattacgttgtgcgcaacgctcatgcaata
ctcacaaatttcctgagaagcggtttggcactcacaatacctatcaatacggtgaagata
gtttacgaaccaaatacggaagatgttttcgctcgtaactctaagcttgtttatactgga
tcttatacaaaaataaaaagttacagactttctcgatggcgtgaatggttagaaagtgaa
gacggatggtctagagggttgaccaaagagaaatcgaaaaagattaaatctacatctctt
gataccctatttgctgagaccaattcgcgtgcttggaaacaagaacaaatgacattgtca
gagggtaaaggaaaaaatgggttgaacactgcgactggtaatggcaaaaagtctggatac
agagcaagaggggccaaatctaatgttaatgctgaaccgcagcgagagaaaccagaagtg
gatttaaatgacgataatacgtctgaagaaacaagtcaaattgacggggaagatgatgcc
aatacccaagacgaggatgaagcagagttatctaaaggtcatcaacgaggaaaaaagtat
gatgaagacaataatgaaatagccgacaagatgtatacgaaagaaaaatcgccgaaagag
aatgtggaagacgaacaaaaaaatcaggaaacttacaagcaatctgcaaatacgtctgcc
accaatttaaataaattagacgctgatatggaggacgataaaaccgacatggaagagcaa
gctgatgagtctttcgatggtgataatacgatggaagatgatcttttgaaggagtag
DBGET
integrated database retrieval system
