Schizosaccharomyces osmophilus (fission yeast): SOMG_03329
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Entry
SOMG_03329 CDS
T09274
Symbol
shd1
Name
(RefSeq) cytoskeletal protein binding protein Sla1 family, Shd1
KO
K20046
actin cytoskeleton-regulatory complex protein SLA1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_03329 (shd1)
Membrane trafficking [BR:
som04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
SOMG_03329 (shd1)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
SOMG_03329 (shd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHD1
SH3_9
SH3_1
PH_SLA1
SH3_2
DUF1720
SAM_4
Motif
Other DBs
NCBI-GeneID:
80876809
NCBI-ProteinID:
XP_056037321
UniProt:
A0AAE9WBX6
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All DBs
Position
2:complement(join(1817064..1820579,1820631..1820864))
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AA seq
1249 aa
AA seq
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MANLPIIGIYKVLYSYEPEPIDPNEQIPETERELFIAEDEIICLLQKGEDDWYLVKRNVN
SPDKDEETGIVPSNYIAEDEPSARMKSLYDYEKQSIDEVSFPADQVLDAYGSIDEDWVLT
RYNQQYGLAPRNYLEPSDASASTSAPSVSAPPAPASAVESQPRPSPSQQTRLPQQQIQQP
PPPPIPPIQSPTSASSPPPPPPVPPLPQDYSSPSSNVAPAEEEDLSDVDEPDDYYTSNRE
QKVPPTYTLPQTETLPPPPPPPAPAGPAKSVSSPPPPPLPPVQPPRPSVSTSTATATSRR
SNVPSSPTSPSDAYGDPGRHIKLQPGRVQEESNMDNNMSFDDPAYRKWEVREVVGKKKKR
TGILAINNRSVVLTFTKSMENAEIFSVTDLINYSAERKHVFVEYKRDEGISSLHLHANSN
GNADSIIRTLGDVAGSTRAAGLREIAEASGKPMPNLPSDSALYKLNEASEKSGANGGRTG
FYEASTVYNSSRSPADEGTSAAPSGAEKMGTIVYGFEAEAPDELTVSVDDRVVIINDTAS
SDWWKCRLNGKEGVVPASFVKSDASINERSASKPSTGNLSRKSSRHEQKEEPKPEKKDTH
RRSRSHSVVKPDVTKLRTWTDRTGAFKVDADFLGFSDDKIHLHKSNGVKISVPSTKMSYK
DLDFVELMTGKKVYSRSERRKETHKEPRSKHAKENDEDIPPPQPARPQSRPTLVPPIGTE
AKDKIDVIEERPRITYDWFDFFLRCGVDFTVCNRYTRNFNNEHLDETCIPSLTPEMLRTL
GLKEGDVIRVMKHVNELNGVSSSPAVLRPSVAEMKSLSPSSSTPEVQMPQPTPSRALNTE
PAIAMNQQFEDDAWSNRPIEEPTIRSSSVPQHKTQLESDMQKMGLSEKQKISEPAPRPSS
VPTAKVSEKKVEDNEKSSQPSLAPQPTGITIQNAYFTAPPPTYSDPFQSPLYVQPTGFQP
PASALPAQTTGFQAQMPVLSMQTTGHQQPMDYIASQPTGIKTQPTGFPAQPTGMQYQPTG
LNSQMTGIAMQSTGMQYQPTGAMPQQAKSVMPQSTGQQHDIMSNMQGQRMDLASQPTGLQ
SQYTGFQQPLTPAPMQPSYGYNMQPNLNDQSMYYNVAPTPFAYDQQNMYAPMDQQGYYGT
DMQGQMGMQQPYMQNYYDPSQQMAYGYDTNGYDAYGAGYGYGQHYGGTPNEISNDPVSNP
GLYMPSGYENMQQPSDYYQPSFTAVDHNENPNARKASITQATPDNPFGF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatttaccaatcataggtatttacaaggttttgtacagttatgagccggaacca
atcgatccaaatgaacaaattccagaaacagaacgagaattgttcatcgcggaggacgaa
attatctgtcttctgcaaaaaggtgaagatgattggtatttagtcaaacgaaacgtcaat
agtcctgacaaagatgaagaaactggtatcgttccttcgaactacattgctgaggatgaa
ccctcagcaaggatgaaaagtctttatgattatgaaaagcaatcaatagatgaggtttcg
tttccagctgatcaggtgttggatgcttacggaagcattgacgaagattgggttttgaca
agatacaatcagcaatatggccttgccccaaggaattatcttgaaccttcagatgcatct
gcttctacatcggcgccaagtgtctctgctccaccagcaccggcttctgctgtggagtct
caaccacgaccttcaccttcgcagcaaacccgtcttcctcaacagcaaatacaacaacca
ccaccaccaccaatacctcctattcagtcacctacatccgcttcctctcctcctccacca
cctcctgtccctccattacctcaagactattcatcaccatcatctaatgtggctcctgcc
gaagaagaagacttgtccgacgttgatgaacctgatgactattatacttcaaacagagag
caaaaggttcctcctacatatacactaccacagaccgagactttaccaccaccgccacct
cctcctgcacctgccggacctgcgaagtctgtttcttctccaccaccaccccctttacct
cccgtacagcctccaaggcctagcgtaagcacttctactgctaccgcgacttcacgacga
tccaatgtaccttcctctcccacttctccatcagacgcttatggagatcctggtcgacat
attaaacttcagcctggaagggttcaagaagaaagcaatatggataacaatatgtccttt
gatgatcctgcttataggaaatgggaggttcgtgaagtagtcggtaagaagaagaagcgt
actgggattctcgctatcaataacagatccgtcgtacttaccttcacaaagagcatggaa
aatgcggaaatcttttcggttaccgacctgataaattattctgctgaacgaaagcacgtt
tttgttgaatataaacgagatgagggaattagctccttacatttgcatgctaatagcaat
ggaaatgctgatagcatcattcgtactttaggcgacgttgctggatccactagagcagct
ggtcttcgagaaattgctgaagctagtggcaaacctatgcctaatctgccatctgattct
gccttgtacaagttgaacgaggcttctgaaaaatctggtgctaatggtggaagaactggt
ttctatgaagcttccactgtatacaacagtagtaggtcacctgctgacgaaggaacatcg
gctgctccttcgggtgccgaaaaaatgggtaccattgtttatggatttgaagccgaagcc
cctgatgagttgactgtgagtgtagatgatcgagttgttatcataaatgatactgctagt
agtgattggtggaagtgccgtttaaatggtaaagagggtgtggttccagccagtttcgtc
aagtcagatgcttcaattaatgagaggtctgcttccaaaccttccactggaaacttatcg
agaaaatcttctcgacacgaacaaaaagaggaaccaaagcctgaaaagaaggatactcac
agaagatctcgtagtcattctgtcgtcaagcctgatgttacgaaacttcgtacttggacc
gacagaactggtgcttttaaggttgatgctgattttttgggttttagtgatgataaaatt
cacttacataaatcgaatggtgtgaagatttctgtaccaagtacgaaaatgtcttacaaa
gaccttgatttcgtggagcttatgactggcaagaaggtttattcccgttctgaacggcgc
aaggaaacacataaggaaccccgtagtaaacacgcgaaagaaaatgatgaggatattcct
ccaccacagcctgctcgtcctcaaagcagaccaactttagttcctcctattggcaccgaa
gctaaagataaaatcgatgttattgaggagagacctagaattacatacgactggtttgac
tttttccttcgctgcggtgttgatttcactgtctgtaaccgctatacccgtaattttaac
aatgagcatttggatgaaacatgtattccttctttgacgcctgaaatgttgcggacttta
ggtcttaaagaaggtgatgtgattcgtgtcatgaagcatgtgaacgaacttaatggagta
tcttctagccctgctgttttaaggccttctgtcgcagaaatgaaatctctgtctccatct
tcatctactcctgaagtgcaaatgccacagcccacaccctccagggctttgaataccgag
cctgcgattgcgatgaatcaacaatttgaggatgatgcctggtcaaatagacctattgaa
gaacctactatcagatcgtcttcagttcctcaacacaaaactcaactggaatcggatatg
cagaaaatgggtttgtccgaaaaacaaaagatttctgagcctgctcctcgtccttcatcg
gttccaactgcaaaggtttctgaaaagaaggtcgaagataacgaaaaatcatctcagcca
tctctagcaccgcaacctaccggtattaccattcaaaatgcttattttacagctccaccc
ccgacttattcagacccttttcaatcccctctgtacgtccaaccaacagggtttcaacca
cctgccagtgctttacccgctcagactactggcttccaagctcaaatgccagtattatct
atgcagacaactggacatcaacagccgatggattatatagcttctcaacctactggcatc
aagacccagccaactggatttcctgctcaacctactgggatgcaataccaaccaactggc
ctgaatagtcagatgacgggtattgcaatgcagtcaactggaatgcaatatcaaccaact
ggggctatgcctcagcaggctaaatccgtaatgcctcaaagcactggtcaacaacatgat
attatgtcgaacatgcaaggtcagaggatggatttggcatctcaaccaaccggtttacaa
agtcagtatactggttttcaacaacctctcacccccgctcctatgcaaccgagctacggg
tataatatgcaacctaaccttaatgaccagtcaatgtattataatgttgcgcccactccg
tttgcatatgaccaacaaaacatgtacgcacctatggatcaacaaggatattatggaaca
gatatgcaaggtcaaatggggatgcagcaaccttatatgcaaaactactatgatccttca
caacaaatggcctatggttatgataccaatgggtatgatgcatacggtgctggatatgga
tacggtcagcattatgggggtacgccaaatgaaatatcaaatgatccagtttcaaatcca
ggcttatatatgccttcaggctacgaaaacatgcagcagccatctgattactatcaacct
tcttttactgcagtagaccataacgaaaatcccaatgccaggaaagcgagtataactcaa
gctacgccagataatccatttggattttga
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