Schizosaccharomyces osmophilus (fission yeast): SOMG_03356
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Entry
SOMG_03356 CDS
T09274
Symbol
pol1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOMG_03356 (pol1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
som03032
]
SOMG_03356 (pol1)
Enzymes [BR:
som01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOMG_03356 (pol1)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
SOMG_03356 (pol1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-DNA_Pol
DNA_pol_alpha_N
CAP_assoc_N
Motif
Other DBs
NCBI-GeneID:
80876835
NCBI-ProteinID:
XP_056038534
UniProt:
A0AAE9WDD2
LinkDB
All DBs
Position
2:complement(join(1881676..1885595,1885697..1885997))
Genome browser
AA seq
1406 aa
AA seq
DB search
MRKRNAAVKPTSKFAELRALREAGKTRATVYEDKEEDDLYDKVSEEEYLKVVRQRLDQDD
FVVDDNGAGYVDNGYDEWDRGYSDDEEETEETGSKKPRKKKTKHALADNNSQPISSFFKA
KPIQPSNHSLKHQSNNDDDFMAQILGSVDQDLTDAPSTKSKLSKGKAQATVGVAKTASTN
LFSNLDVMQTPSPSTTENESFRSLTAHQSQTAEDAPVPSSLVLADDKENFSDDLDLEPVL
PEKPEDSNQMEEDEVSVPDESAAPILNNPIKEPILPAISNLPSSFAPPLSSELDTSAFTE
LNSHLHNLEVLDPPAVNKSHCISPSDVVEDDGSLNFFWLDYTEIYGSLCLFGKVYDKKSK
SFVSTFLKVDGIMRSLFFLPAASNGQSLSSSDQQKKVYDEVSGFLSKLGVKEWKSKVSKY
KYAFELDDIPKETDYLEVLYSYSYPQFPSDLKGNTFSHVFGTNTSLFEQFVLTRRVMGPC
WLKIQNPNFDSVRNASWCRVEVGCSSAHGISVTNESKLPQTPPLTVMSLAFRTLINSASN
KQEMVMISARVYENVHIDRGLSANDMPSFTFTIIRPLKQIFPNGFESITRNHKPPIYCER
SEISLLNSFLNKVQDYDPDVYVSHDFETMYSVLLSRLKDRKIHNWHSIGRLRRGDWPRSY
NRSSLQFVERQIACGRLISDLSNDFGRSMIKVQSWSLSEIVQKELNIKRQDINQEKALQS
WTDTARGLLDYVTHCEIDTYFIAAVGFQVQMLQLSKNLTNIAGNSWARTLAGTRAERNEF
ILLHEFKKNGYIVPDKQYNTKRNVDILDLEDSEFQEETPGKKKDKYKGGLVFEPQKGLYD
TCILVMDFNSLYPSIIQEYNICFTTVQRSSSTKDGEDQIPDVPTASSEQGIFPRLIANLV
DRRRLIKGLLKDKTATPTQLLQWDIQQQALKLTANSMYGCLGYTKSRFYARPLAVLITYK
GREALMNTKELADAMGLQVIYGDTDSVMLNTNVTDKQQALIIGNEFKEKVNERYRKLEID
VDNVYQRMLLHAKKKYAALQVDDQGNSVLDVKGLDMKRREYCMLAKEASKYCLDQILSGE
LSETVVSNIHIYLSEFADQMKSGKFTANKFIIFNRLGKNPEDYPNGKTMPFVQVALKKKA
RGENARVGDVIPFIITGSDSEGHPADRAYSPQDVMNPSNNLIVDYNYYLTHQILPPVERV
IAPIEGTNRARLAECLGLDPKKYYTYEASESSAFERYESTLSDDQRFTNVSPMVLRCPSC
FAISFTMPNVKSIQETLFVNTVECDCGFEYPTFMIVLQFTTQIRYFINLYYEGVLVCDDS
SCGNRTRQMNVYGKRCCNGNCRGNMAFEYNDKMLYNQIKFILKAVQNTNGATRNGILRCN
ALSNSLSKFMNNNAREFVDMASIFSS
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaagaaatgcggcagtaaaaccgacctcgaaatttgctgaacttcgtgcctta
cgtgaagctggaaaaactagagctaccgtttatgaggacaaagaggaagatgatttatat
gataaagtctcagaagaagaatacttgaaggttgttcgacagcgtttagatcaagatgac
tttgtagtagacgataacggagctggatacgttgacaatggttatgatgaatgggaccga
ggttacagtgacgatgaagaggaaactgaagaaacagggtcgaagaagccaaggaagaaa
aaaaccaagcatgctttagcagacaacaacagtcagcctattagctcatttttcaaagcc
aagcccattcagccaagcaatcatagtctgaagcatcaatccaataatgatgatgatttt
atggctcaaattttgggttcagtcgatcaggatctcacggatgcgccgtctaccaaaagt
aagctttcgaagggtaaagcacaagcgactgtaggcgtcgctaaaacagcgtctacaaac
cttttttcaaacctagatgttatgcaaacgccatcaccatcgacaacggaaaatgaatct
tttcgttctttaacagctcatcagtctcaaactgctgaagatgcaccagttccaagttct
ttagttcttgctgatgataaagaaaactttagtgacgatctcgatctggaaccagtgctt
ccagaaaaaccagaagattccaaccagatggaagaagacgaagtttcggttccagatgaa
agcgcagcccctattttgaataatccaataaaggaaccgattcttccagctatatctaac
cttccatcttcgtttgcaccacccttgtcgtccgagttagacacttcagcttttacagaa
cttaactctcacctacacaatttggaagtccttgatcctccggctgtcaacaaaagccat
tgcatctctcccagtgatgtcgtagaagatgatgggtctttgaattttttttggttggac
tatacggaaatatatggtagcctctgtctttttggaaaggtttatgataaaaagtccaag
agcttcgtctctacattccttaaagttgatggtattatgcgttctttattctttttacct
gctgcctcaaatggacaatctttatcttcttcggaccagcagaaaaaagtatatgatgaa
gtctcaggatttctttccaaattaggtgtaaaggaatggaaatccaaagttagcaagtat
aagtatgcgttcgagttagatgatattccaaaggaaactgattatttagaagtcctatat
tcctattcttaccctcaatttccttctgatctaaaaggcaataccttttctcatgtattt
ggtacaaatacttcgttgtttgaacagtttgtcctcactcgaagagttatgggaccttgt
tggttaaagattcaaaacccaaattttgattctgtacgcaatgctagctggtgccgtgtt
gaagtcggctgttcttctgctcatggaatttcagtaacaaatgagtccaaattacctcaa
acgcctcctctaactgtgatgagtctggcttttcgcactcttataaattccgcatcaaac
aaacaggaaatggttatgattagtgctagagtttacgaaaatgttcatattgatcggggg
ctttcagctaatgatatgccatcttttacatttaccattattcgtcctctaaaacagatt
tttcctaacggttttgaaagtatcacgcgcaaccataaacctccgatttattgtgaaagg
tctgagatttctttattaaattcattcttaaataaggtacaggattacgatccagatgtt
tatgttagtcatgacttcgaaactatgtactcagtcctactttcaaggttgaaagaccgt
aaaattcataactggcatagcattgggcgtcttcgtcgaggtgattggccacgctcttat
aacaggagtagtctacaatttgtggaaagacaaatagcatgcggaagattaatcagtgat
ctttccaatgactttggaagatctatgattaaagtccaatcttggagcttatccgagatc
gttcaaaaagaactcaacattaaaagacaggatatcaatcaagaaaaggctttgcagtcg
tggaccgatacagctcgtggattgcttgattatgttacgcattgtgaaattgacacttac
tttatcgctgctgttggtttccaggtgcaaatgttgcaactatcaaaaaatctgactaat
atagccggtaactcatgggctaggactttggctggtacccgagccgaaagaaacgaattc
attcttttgcacgagtttaagaaaaatggttatattgttccggataaacagtataatacc
aaacggaacgttgacatccttgacttggaagattcggagtttcaagaagaaacacctgga
aagaaaaaagataaatataaaggtggtttggtttttgagcctcagaaagggctatatgat
acgtgtatactagttatggattttaacagtttgtaccctagtattattcaggagtacaac
atctgctttactactgtgcaacgttcttcttctactaaagatggtgaagaccaaattccc
gatgttcctactgcttcaagtgaacagggaatcttccctcgtctaatcgcaaatttggtt
gatcgccgtagattaattaaaggcctgttaaaagacaaaacggccactccaactcagcta
ttacaatgggatattcaacagcaagcccttaagctgacggcgaattcaatgtatggatgt
ttaggttacactaaatctcgtttctatgctagacctctagctgttctaattacttataaa
ggaagggaagctttaatgaacacaaaggaacttgctgacgctatgggattacaagttatt
tacggtgatacagattctgtcatgctcaatacgaacgttacagataagcagcaagctctt
ataatcggtaatgaattcaaggaaaaggtgaatgaaaggtacaggaagttagaaatcgac
gttgacaatgtctaccagcgtatgttactacatgctaagaaaaaatacgcagctttacaa
gttgatgatcaaggaaattcggttttggatgttaaaggtcttgatatgaagcgtcgagag
tattgtatgcttgcgaaagaagctagtaagtactgcttagatcagattttatctggtgag
ctttcagagacagtcgtcagcaacatacacatctatctttctgaattcgctgatcaaatg
aagagtgggaaatttacagccaacaaatttattatctttaatcgtctcggcaaaaaccct
gaagattatccaaatggtaaaacgatgccgtttgtacaggtagcgttaaaaaagaaagct
agaggagaaaatgcgcgcgttggcgatgtaatcccttttattattacaggctcagactca
gaagggcatcctgctgatcgtgcttacagtccccaagatgttatgaatccaagtaacaat
ttgattgtagattataattattatctgacacatcaaattcttcctccagttgaaagagtt
atcgccccgatagaaggcaccaaccgcgcccgtttggctgaatgtttaggattggatcct
aaaaagtactatacctatgaagcatcagagtcatcagcttttgagagatacgaaagcact
ttatcggatgaccaaaggtttacgaatgtttcacctatggttttgagatgtccgagttgt
tttgcaatctcgtttacgatgcctaatgttaaatcaatccaagaaacgttatttgtaaat
acagtcgaatgtgattgcggctttgaatatcccacgtttatgatcgttctgcaatttact
acccaaattcggtattttataaacctttattatgaaggtgttttagtatgtgatgactct
tcgtgtggaaatcgaactagacagatgaacgtctacgggaaacggtgttgcaatggcaat
tgccggggaaatatggcttttgagtataatgataagatgctttacaatcaaatcaagttt
attctgaaagctgtacaaaatacaaacggcgcaacacgcaacggcattctgcgatgcaat
gctctgagcaacagtctatctaagttcatgaacaataatgctcgtgaatttgtggatatg
gcaagcattttttcttcttga
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