Schizosaccharomyces osmophilus (fission yeast): SOMG_03426
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Entry
SOMG_03426 CDS
T09274
Symbol
cid14
Name
(RefSeq) TRAMP complex poly(A) polymerase subunit Cid14
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_03426 (cid14)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_03426 (cid14)
03016 Transfer RNA biogenesis [BR:
som03016
]
SOMG_03426 (cid14)
Enzymes [BR:
som01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SOMG_03426 (cid14)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
SOMG_03426 (cid14)
Transfer RNA biogenesis [BR:
som03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
SOMG_03426 (cid14)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
PAP_NTPase
Polbeta
TUTase
Motif
Other DBs
NCBI-GeneID:
80876905
NCBI-ProteinID:
XP_056038093
UniProt:
A0AAF0AX81
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All DBs
Position
2:2055044..2057074
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AA seq
676 aa
AA seq
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MAKKSTFSKANKANKIKKKSKFDEREPLPRRIFKKGDRNRRFKNNDGKRKSEYPDELEVN
NNFSLLEQEQEENRKEREGTQHSRQKDSTSDFLKPSVNQSGRVDPLETLEKLDLPEEAIK
KGAPSILVGLEKLNGKTEKPGPEPKNAVDENADYIGFDWNSDEDVKDTSKKEANDVGPNN
IPGFMQNNGRFFHEASKPNEDISRKRKRMAYEIDPSSCPWHRPYKADVEVSRLLHQDINQ
FVEYITPTPEEHAVRKSLISRINSAVLKKWPDVSVYVFGSFETRLYLPTSDLDMVIMSSD
SHYRGSKKDMFVLAHHLRKCKVATDIQVITTANVPIIKFVDPITKIHVDASFNQAGGLKT
CLVVNGFLKKYPALRPLVIIVKHYLNMRALNEVFLGGLSSYAIVCLVVSFLQLHPRLSTG
SIREEDNYGVLLLEFLELYGKRFYYDAVGIAVHNGGFYFSKKKQGWLRPNQPYLLSIMDP
VEFTNDVSKSSRGLLRVKATLGNGFDLLTNELFALASRIEREGSRRASDFPSILGSIISV
DEGVRKHRVHMLNCFNEHPIPLEPMVDVEQLSSIDVDHLPTDNVDLQFVEDESDSDEVEQ
ETDELVGKKGLSDLQEIDQNQGLSDASDSRMNAKDLFNIDEESSEEYEKNNDEPTRDYQR
SDEEESRATKVRRKTR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaaagtacattctccaaagcaaacaaggctaataaaataaaaaagaaatca
aaatttgatgaacgagaacctttacctagaaggatttttaaaaaaggcgataggaatcgc
agatttaaaaataatgatggaaaaaggaaatcggaataccccgacgaattggaagtgaac
aataactttagtcttttggaacaggaacaggaggagaacaggaaagaacgtgaaggcacc
cagcattcacgacaaaaagatagtaccagtgatttcttaaagccgtcagtgaatcagtcg
ggacgagtcgatcctttggaaaccctagaaaagttagatcttccggaagaagcaatcaag
aaaggagcgccctcgatcttagtaggtttagagaagctgaatggtaagactgaaaagcca
ggaccagaaccaaagaacgctgtagatgaaaatgcagattatattggtttcgattggaat
agtgacgaagatgtaaaggacacttcgaaaaaggaagcaaatgatgttggacctaataac
attcctggctttatgcaaaataacggtcggtttttccacgaggccagcaaaccaaatgag
gatatcagtaggaagagaaagcgtatggcatacgagattgatcctagctcttgcccttgg
catagaccttacaaagcagatgttgaagtatctcgactcttgcatcaggatataaaccaa
tttgttgaatatataacgccgacgccggaagaacatgctgttcgaaaatctttaatttcg
cgaattaatagcgcggttttaaagaaatggccagatgtttccgtatacgtatttggaagt
tttgaaacccgtctttatcttcctacctctgatcttgatatggtaataatgtcttcggat
agtcattatcgtggaagcaagaaggacatgtttgtcttggcccatcacctgaggaagtgt
aaagtcgctactgatatacaagttattactaccgctaatgtgcctattatcaaatttgtg
gatcccataacaaagatccatgtcgatgcatcttttaaccaagcgggtggtttgaaaact
tgcctggtcgttaacggctttttgaagaaataccctgctctccgtcctcttgtaattatt
gttaaacattacctaaacatgcgcgctctaaatgaggtgtttttgggtggtcttagcagt
tacgctattgtttgtttggtggtctcttttcttcaacttcatccgagattaagtactggc
tccattcgtgaagaagataattacggggttttgcttttagaatttttagaactttatggt
aagcgtttctattacgatgcagtcggtattgccgttcacaatggtggattttatttttca
aagaaaaagcaaggatggttaagaccaaatcaaccttatttgttatctattatggatcct
gttgaattcactaatgatgtgtcgaaatctagtcgaggtctactccgcgttaaagctacc
ctgggtaatggatttgacttattaacaaatgagttatttgcgctcgcttctaggattgag
cgagagggatcacgtagagcaagtgatttccctagtatcttgggcagcatcatttctgtg
gatgaaggtgttcgtaaacatagagttcacatgctgaattgttttaatgagcatcctatt
ccattagagccgatggttgacgttgaacaactctctagtattgatgttgatcatcttcct
acggataatgtagatttacagtttgtggaagatgaatctgattcagatgaggttgaacag
gagacggatgagttagtaggaaaaaaagggctaagcgaccttcaagagattgatcaaaat
caagggttgtcagatgcttcggattctcgtatgaatgcaaaagatctatttaatattgac
gaagaaagctccgaagagtacgagaaaaacaacgatgagcccactcgcgactatcaaagg
tctgacgaagaggagtcgcgtgcgacaaaagtgagaaggaagactcgatga
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