Schizosaccharomyces osmophilus (fission yeast): SOMG_03476
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Entry
SOMG_03476 CDS
T09274
Symbol
nup155
Name
(RefSeq) nucleoporin, WD repeat Nup155
KO
K14312
nuclear pore complex protein Nup155
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SOMG_03476 (nup155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_03476 (nup155)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SOMG_03476 (nup155)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
80876955
NCBI-ProteinID:
XP_056037770
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Position
2:complement(join(2157620..2161326,2161379..2161483,2161538..2161670))
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AA seq
1314 aa
AA seq
DB search
MDIDGASFSSSKNGLYEPLARGFAAIEAATERDTKLPELGDIIGHVHSPEYVSQPLNGWK
PFYLRSVINIPDRIFEQYNRTECFTQMGLFSEIQRAWITVDNRLFLWDYLSGQNFQAYED
LSHTIVSVKLVQPKKNVFVEEVQCLLVIATTQEIILLGVSIDKFTGELTFYSTGMQIAIP
GLNVNNIVSSKDGRIFFSGNRDPNLYEFYYQSDEGWFSRKCNKVNLTGSAIDNFVPSFFS
YGVHGDGVKQIAVDDSRNLLYVLRESSSVTCYEISSSNIHRCVSYSFSSMISQAQMLNAS
SILLDPRSTKLVSIVPVPAYESQQIYCVAITSTGCRFYMRGGRSATSYFETSDGSFATNP
PSTLQVTHIRFPPSFQTNDYQPKRQFSGSSFFPQSQSVPQQPAQDLSTQTKREFMDCSSL
STVFTFDLFFAISSSDANAGDTLCCTAPEVGRIANAWQSGSQPSLVESAMYLPIKGFVQD
VKCLQNSEERNELVSQFNTPPPSFAVLTNTGVYIIVHRRPVDILASAIRMGPSSSSGIDG
QVQMFFESVGRAEGCATCLGIISGRLDQNDFTASSANFAGPTTKLTQADLLEIAKKYFIE
FGGKAFIDQSRYNNQYDASSYELVRLSGCHDGLASSISRLLRTVWKKPVMLTVPNSKKRV
DYAPSFKADELLKIQSGLLSLSSFLESNKSFIEGLNSSDSLVGSSNMGEEIAVQAEHRAL
SALMLVLQQMIEGISFLLFLNESDVSDFIAITSSISPESQNSCSKLTFGEFFTSKNGREV
TKELVNALVNKHLRAGGNIDLVSQLLRKRCGSFCSADDVLVFKAVESLKKAKETVDIEDR
QSLVELSYNLFKKSAHVFTPEDLRLAVEEYKSLNSYVSAVNLALHVASARDDKDQALSYL
IDGMPQNDTRADVFANRSKCYQYVFQILDDLESKSSEESNQTKMSVYNALQQSKDELFHY
CFYDWYASKGFADRLIEIDSPYIQNYLERNSTKDVQIAILLWQYYAKREMYYYAAIVLFD
LATSNLSLNLEQRIEYLTRAKGFGSCHIPNLLRQKMNKVMLSVCEQLEVASIQDDLLVTI
LNDVKIPASKQQELSSKLNVEILSLTELFNNFADPLGYGEICLSIFQSADYHGIDEIIGC
WEFIVKTTHENAVTSPIGSSPVDSVASTLRNLTLRFSQSENVFPVEKIVALAENYSFEQQ
SESTSAGWVVDVFLSAGISHELIFIILNQLYDRREKPWQGKDRLLYLVKEISHLMKLWYD
VSLKAGVAQAFKPNFDAPFVLEAIEKYKAVLTDPKSMSCKEELQSLELAIRRTY
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatggtgcttctttttcctcctcaaaaaatggactatacgagccgttagca
agaggatttgctgccatcgaagcagcaacagaacgagatactaaattgccagaacttggc
gacatcattggtcatgtgcattctccagaatatgttagccagccgttgaacggctggaaa
ccattttatttacgttcagtaattaacattccggatcgcatttttgagcaatataaccga
actgaatgctttacccagatgggtttgttttctgaaatacagcgtgcatggattacagta
gacaatcgtcttttcctttgggactacttgtctggccagaactttcaggcatatgaagat
ctctcacacactattgtcagtgtgaagcttgttcaaccaaagaaaaatgtgtttgtggag
gaagtgcagtgtttgctggtaattgctaccacccaagaaattatattacttggcgtttcc
attgataaatttaccggagagctcacattctattccactggaatgcaaattgcaattcct
ggattaaatgttaacaacatcgtttcttctaaggatggccggattttcttttcaggcaat
cgagaccctaacctgtacgaattttattatcagtctgatgagggttggttttctcgtaag
tgcaacaaagtgaatcttaccggatctgctattgacaacttcgtaccttcatttttctct
tacggagttcatggagacggtgtcaaacagattgctgtcgacgattcacgaaatttgctg
tacgtcttgcgtgaaagctcatctgttacctgttatgaaatttctagttccaatatccat
cgttgtgtctcttattccttcagttccatgatttcccaggcacaaatgctaaacgcttcc
tcaatcttgcttgacccaagaagtactaagcttgtatcaatcgttcctgtccctgcttat
gaatctcaacaaatttattgtgttgctatcacttcaactggttgtcgattttacatgagg
ggcggacgtagtgctacttcctatttcgaaacctccgatggttcttttgctacaaatcct
cctagtactttacaagttactcacattcgttttcccccttcttttcagactaacgactat
cagcccaagcgccagttttctggatcttcctttttccctcaaagtcaatctgtcccgcaa
cagccagctcaagacctctctactcaaacaaagcgcgaatttatggattgctcttccttg
agtactgttttcacttttgatttattttttgctataagttcttctgatgctaatgcaggc
gatacactctgttgcactgctcctgaagtgggcagaattgctaatgcctggcaaagcggg
tctcaaccttcattagttgaatctgccatgtatcttccaataaagggatttgtacaggac
gttaaatgccttcagaactctgaagagcgtaatgaacttgtttcccaatttaacacacct
cctccaagctttgctgttcttacaaacacaggcgtctacataattgttcatcgtcgtcca
gtcgatatacttgcttctgctattcgaatgggaccttcttcttcttctggaattgatgga
caagtgcaaatgttttttgagagtgtcggacgtgcggagggttgcgctacttgtttgggc
attataagcggtcgcctcgatcaaaacgactttactgccagcagcgccaactttgcaggc
cctaccacgaagttgacacaagctgatcttttggaaatcgctaaaaagtatttcattgaa
tttggtggtaaagcttttattgaccaatctcgctataacaaccagtatgacgcttcttct
tatgagcttgtacgtctatcaggttgtcatgacggccttgcttcttctatttcacgtttg
ttacgtacagtctggaaaaagccggttatgttaaccgtacccaattcgaaaaaacgagta
gactatgcaccttcttttaaagctgacgaactactaaaaattcagtctggtttattatct
ctatcgagctttttagaaagcaacaagagttttatagaaggacttaatagctctgattcc
ttagttggctcttctaatatgggagaagaaatcgctgtacaggccgagcatagagcttta
tcagctttgatgttagtccttcagcaaatgattgaaggaatttcgttccttttgtttctc
aatgaaagcgatgtttctgattttattgcaattacttcctccatatctcccgaatctcaa
aattcttgttcaaaattgacttttggtgaattcttcacatctaaaaatggtagagaggtg
acaaaggagctcgtcaatgccttggtcaacaagcatcttcgagccggtggtaatatcgat
ttagtgagccagttactacgaaagagatgtggaagtttctgtagtgcagatgatgtactt
gtttttaaagccgtagagtctttgaaaaaagctaaagaaaccgttgatattgaagaccgc
caatcattagtcgagctttcttacaatcttttcaaaaaatccgctcatgtttttacaccc
gaagatcttcgtttggctgtcgaagaatacaagtctttaaattcgtatgtatctgcggtt
aatttagcacttcatgtagctagcgctcgcgatgacaaagatcaagccctttcatatctt
atcgacggtatgccacaaaatgatacccgtgcagacgtctttgcgaaccgttccaaatgc
tatcaatatgtgttccagatacttgatgacttggagtctaaatcatctgaagaatctaat
caaacaaaaatgtctgtgtataatgccttacagcaatcaaaggatgaattattccattac
tgtttctacgactggtatgcaagcaaaggttttgccgaccgattaattgagattgattca
ccttatattcaaaattacttggaaaggaacagcacaaaagacgtacaaattgctattttg
ctttggcaatattacgctaaaagagaaatgtattattatgcagctattgttctttttgac
ttggccacaagcaatctttctttaaatcttgaacaacgaatcgaatatttaactcgtgct
aaaggttttggtagctgccacattcccaatcttttgcgccaaaaaatgaataaggtaatg
cttagtgtatgtgaacagctggaagttgccagtattcaagatgaccttttggttactatt
cttaatgatgtaaaaattccagcctcaaaacaacaggagctttcgagcaaactgaacgtg
gaaattttatcgcttacagagttgtttaataattttgctgatcctttgggatacggtgag
atttgtttgtctattttccaaagtgctgactatcacggtattgatgaaataattggttgt
tgggaatttattgttaaaacaacgcatgagaatgctgtaacttcacctatcggatcttct
ccggtggattcggttgcttctactttgagaaatctcacacttcgtttttctcaatctgag
aatgtctttccggtggagaagattgttgctcttgctgaaaattacagttttgaacagcaa
agtgaatcgacttcagctggttgggttgtcgatgtttttctaagcgccggtatttctcat
gaattgatatttattattttgaatcagctctatgaccgtagagagaagccttggcaagga
aaagacagattactgtatcttgtaaaagaaatttcacacttaatgaagttatggtacgac
gtcagtcttaaggccggtgttgcccaagcattcaagccaaattttgatgctccttttgtt
cttgaagccatcgaaaaatataaggctgttctaactgaccctaaatctatgagctgtaag
gaagaattacaatctttggagttagcaatccgccgcacttactaa
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