Schizosaccharomyces osmophilus (fission yeast): SOMG_03512
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Entry
SOMG_03512 CDS
T09274
Symbol
not3
Name
(RefSeq) CCR4-Not complex NOT box subunit 3/5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_03512 (not3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_03512 (not3)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SOMG_03512 (not3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SOMG_03512 (not3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
WKF
DUF7310
Motif
Other DBs
NCBI-GeneID:
80876991
NCBI-ProteinID:
XP_056038090
UniProt:
A0AAF0AWL7
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Position
2:complement(join(2227067..2228677,2228804..2228998,2229046..2229083,2229143..2229164))
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AA seq
621 aa
AA seq
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MSARKLQVEIEKTFKKVTDGIVIFDEVYEKLNASASASQKEKLEGDLKTQIKKLQRLRDQ
IKTWASSNDIKDKKALIENRRLIEAKMEEFKAVEREMKIKAFSKEGLSIALKMDPREKEK
HDTIQWISSAVEELERQVELLEAETESLRATFKRGKRDLSKQAYLSELESRIETHRWHQE
RLELIMRRLENSQISSDAINNIQDDIMYYVESSQDADFAEDMNIYDGLDLDDSSGIFDAE
RSENSSSPISDTSSQKDDESVPVVDSPSPIESSLKDVLSSPTFMASVPQAHEEELDAPDI
SSPPPKENSQNEIDGSSRPQLSNNTPSFAKAAAVAAPSNSASFVTSAPTIQNKQTVSPRI
SNASAPKEKKYAFAAAAAAATTLSKDPIGTRADVPASPKVGSGNIQSKSDTTGHYSSPKP
QESKPDAMPEVSEQIPEINHDSITVEESLSPPPEYIQDLVGALNASKGRLQYPMNKEKLT
EALNISCVYVPDAVDAAKPKFYVPKDPYPVPHYYPQQPLPLFDSPEMTEVVDPDTLFYMF
YYLPGTYQQYLAGRELKKQSWRFHKKYTTWFQRHEEPKLITDEYESGTYRYFDFEGDWVQ
RKKADFRFMYEYLEDDEDWSR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcgaaaattacaagtggaaattgaaaaaacgtttaaaaaagtgacagatggg
attgtcatttttgacgaagtttacgaaaagctgaatgccagcgccagtgcctctcagaaa
gaaaaactagaaggcgatttgaaaacgcagattaaaaagctacagcgtttacgtgatcag
atcaagacgtgggccagcagtaatgatattaaagacaagaaagctttaatagaaaatcgc
cgactgatcgaagcgaaaatggaagaatttaaagccgtggaacgagaaatgaaaatcaag
gcattcagtaaagaaggactgagtattgccttaaagatggatccaagagaaaaggaaaag
catgacacgattcagtggatttcgagtgcagtagaagaattggagcgccaagtggaactg
ttagaagccgagacggagagcttgcgtgccacattcaagcgaggaaaacgtgatctttct
aagcaagcttatctttccgaactggagtcacgtattgaaacccacagatggcatcaagag
agactggagctaattatgcggcgcttagaaaactctcaaatatcttcagatgcaatcaac
aacattcaagacgatattatgtattatgtcgaatccagtcaagatgctgatttcgctgaa
gacatgaacatttatgatggacttgatttagatgactcttcaggaatttttgatgcagag
agatctgaaaactcttcttctccaatctctgacacctcttcacagaaagacgatgaaagc
gtaccggttgtggattccccatctccgattgaatcatcattaaaagacgttctgtcatcc
ccaactttcatggcttcggtaccccaagcacatgaagaagaattggatgccccagatatt
tcatcgcctccccccaaagagaattcgcaaaatgagattgatggttctagtaggccacaa
ttgtccaataatacaccatcttttgctaaagcagctgccgtagctgctcccagcaattcc
gccagctttgttacttcagctccgacaatccaaaataagcaaactgtttctcctcgaatt
tcgaatgcttctgctccaaaggaaaagaagtatgcgttcgctgccgctgctgccgccgct
actactttatcaaaagatcctattggcacacgagcggacgtccctgcttctccaaaggtg
ggatctggcaatatccaatccaaatcggataccacaggccattattcatcgccgaagcct
caagaatcaaaaccagatgctatgcctgaggtttcggaacaaatccctgaaataaatcat
gatagtatcacagtagaagagagcttatccccacccccggagtatatccaagatttggta
ggagcgctaaatgcttcaaaaggtcgacttcaataccccatgaataaagaaaagttgact
gaggcactcaatattagctgcgtgtacgtacctgacgcagtcgatgctgcaaaaccaaaa
ttttatgtacctaaagatccttatccagtacctcactattatccgcagcagcctcttccc
ttgtttgattctccagaaatgactgaagttgtggatccagatacactgttttacatgttt
tattatttacctggcacatatcaacagtatctcgctggacgggaacttaagaaacagagt
tggcgtttccacaaaaagtacactacttggtttcaaagacatgaggagcccaaactgatc
acagacgagtatgagagtggaacttataggtactttgatttcgagggcgattgggtgcaa
agaaagaaggccgactttcgtttcatgtatgagtatctcgaagacgatgaggattggagt
cggtga
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