Schizosaccharomyces osmophilus (fission yeast): SOMG_03575
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Entry
SOMG_03575 CDS
T09274
Symbol
pmd1
Name
(RefSeq) leptomycin transmembrane transporter Pmd1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
som00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOMG_03575 (pmd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
som02000
]
SOMG_03575 (pmd1)
04147 Exosome [BR:
som04147
]
SOMG_03575 (pmd1)
04090 CD molecules [BR:
som04090
]
SOMG_03575 (pmd1)
Enzymes [BR:
som01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
SOMG_03575 (pmd1)
Transporters [BR:
som02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
SOMG_03575 (pmd1)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SOMG_03575 (pmd1)
CD molecules [BR:
som04090
]
Proteins
SOMG_03575 (pmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_29
RsgA_GTPase
AAA_25
Zeta_toxin
DPM3
DUF3201
DUF7475
Motif
Other DBs
NCBI-GeneID:
80877054
NCBI-ProteinID:
XP_056038322
UniProt:
A0AAE9WEC3
LinkDB
All DBs
Position
2:2364717..2368733
Genome browser
AA seq
1338 aa
AA seq
DB search
MSVSRSSESNKSNNEKDNESILVDKLSTSSVENPEKVVDVVKDPFEQYTPEEREILYRQV
NDTEANLAGYMRIVTCGDKWDYLLQLAGCITSIGAGLGMPLMSLVAGKLAKAFTDLASGR
GAETFQHDVNHFVLYFIYIAVGVFGCSYIYTVTFIVSGERISRRIRQQYLHAVLGQNIGY
FDRLGAGEITTRITSDTNYIQDGLGEKVGLVLFALATFLSGFVIAFIRHWKFTLIISSML
LAILGGIALGVKFITKFTKAQIAQLSSSSTFVEEVLSNIRNAFAFGTQNLLADSYTKFLN
PAKRNGIKKSIVMGLMIGWMFFVAYGAYGLAFWEGGRLLHAGDLTVDKMISCLFAVLIAS
YSLANISPKMQAFVNCSSAAKKIFDTIDRASPIDAFSPAGKAIQHVNGAIELKNVKFVYP
TRPEVVVLDNFSLLCPAGKITALVGASGSGKSTIVGLVERFYDPIAGQVMLDGEDIRDLN
IASLRGYISLVQQEPVLFGATVFDNIAYGLTDDIQSTMTEDELRERVYDAARTANAYDFI
MTLTEQFNTNVGQRGFLMSGGQKQRIAIARAIISDPKILLLDEATSALDSKSEVLVQKAL
DNASRSRTTIVIAHRLSTIRNADNIVVVNSGKIVEQGTHSDLLALNGAYAKLVEVQQLAE
TNNDDVTFESGEEKAGEIVHTTAQDESDSSSIPNSFSLIHEKENDAVSLRDNPLAHLPID
PVPDLPNKTMDSLNEEIPSAQLEGTATNISSWKALIFIHSFVDGTLEIVCLIIGVLASMV
CGAAYPVQAVVYARFLNIFTELNSPDYFHKISIFGVYWLILAIAEFFGYSISEYSMSYVL
QSVLQRIRWHLFRTLLRQDVEFFDRTENTVGALTTSLSTSIQNLEGLTGSTLGTFVQILT
NVVSVSILSLATGWKLALVTLATSPVIITAGYYRVAALDQIQDKLSTSYKTSAAYACEST
SAIRTVASLTRESKVYENYCASLVQPGRETAISSLISGLFFSASQAVTFLVNALAFWYGA
TLMKTGEYTLVQFYTCFIAIVFGIQQAGQFLGYAADVTKAKSSAGSIKYLCDSRPKIDTW
SEGGRKIESLEDSSIVFNDVKFRYPTRKHIQVLRGLNLTVTPGQFVAFVGASGCGKSTTI
GLIERFYDCESGAVEVGGIDIRDYNINDYRKQIALVSQEPTLYQGTIRENIVLGASRDVT
DENIYECCKMANIHDFIMGLPNGYETLSGQKGSSLSGGQKQRIAIARALIRNPKILLLDE
ATSALDSHSEKVVQEALNKASEGRTTVAIAHRLSSIQHADCIFVFDGGVIAEAGTHNELV
NKRGRYYELVVEQGLGTD
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtttcaagaagttcagagtcgaacaaatctaataatgaaaaagataatgagagc
atacttgtcgataagctatcaacgagtagcgtcgagaatccagaaaaagttgtcgatgtt
gtaaaagatccttttgaacagtataccccagaagagcgcgaaattctgtatcgtcaggtg
aatgataccgaggctaatttagcagggtatatgcgaattgttacatgtggtgataaatgg
gattatttgcttcagttggctggctgtatcacctctattggtgctggccttggtatgccc
ttgatgtctcttgtcgctggtaaattagccaaagcttttaccgatcttgcaagcggtcgt
ggtgctgaaaccttccaacacgacgttaaccattttgtattgtattttatttatattgct
gtcggtgtttttggatgttcttatatctatacagtcacatttatcgtatctggtgaacgg
atttctcgtcgcattcgccaacaatatctgcatgcggtcctcggtcaaaacatcggttac
tttgatcgtctcggtgcaggcgaaattaccactcgtattactagtgacacaaattacatt
caagatggtttgggtgagaaggttggcttggtgctttttgctcttgcgacatttctgtct
ggattcgtcattgccttcattcggcattggaagtttacccttattatcagttccatgctg
ttggcaatccttggtggaattgctctcggcgtaaaatttataacgaagtttacgaaagct
cagattgcccagctatccagttctagtacttttgttgaagaggttttatctaatatacgt
aatgcattcgcttttggtactcagaacttgttagccgattcttatacgaaatttttgaac
cccgccaaacgcaatggcatcaagaaatccatcgttatgggactcatgatcggatggatg
ttttttgttgcttatggtgcttatggccttgctttttgggaaggtggtcgtcttttgcat
gctggagatctgactgtcgacaaaatgatcagttgtttgtttgctgttctaattgcgtct
tatagtttggcaaatatatctccaaaaatgcaagccttcgtgaattgctcgtcagcggct
aaaaagatctttgacacgattgaccgagcgagtccaattgacgccttttcgcccgctggt
aaagctattcaacatgttaatggagcaattgagttgaagaatgtaaagttcgtatacccc
acgagacctgaagttgtagttctagacaacttttctttgctgtgcccggcaggcaaaatt
actgctcttgttggtgcgagtggtagcggaaagtccactatagtaggtctcgtagagcga
ttctatgatcctattgcaggacaggttatgttggatggtgaagacatccgagatttaaac
attgcatctttacgcggctatatttctctagtacagcaggagcccgttctgtttggagct
accgtttttgacaatattgcttatggattgactgacgacattcaatcaacaatgaccgag
gatgaactgcgagagcgcgtttacgatgctgccaggaccgcaaatgcttatgattttatt
atgactttgaccgaacaatttaatacgaatgtaggccagcgcggctttttaatgtcgggt
ggacaaaaacaaagaattgcaattgccagagctattattagtgatcctaaaattctactt
ctggatgaagcgacaagtgctttagattcgaaaagtgaagtccttgttcaaaaggctcta
gacaatgcttctagatctcgcacaacaattgtcattgctcatcgtttatcaacaatccgc
aatgccgataacatcgtagtagtcaatagtggaaagattgttgaacagggaacacactcc
gatttattagctttaaatggagcttatgccaaattagttgaagtgcagcaactcgctgaa
acgaataacgatgatgttacctttgagtcaggagaagagaaagctggcgaaattgttcat
acgactgcacaagatgaaagtgatagctcttcgatccccaattcattctctttaatacat
gaaaaagaaaacgatgcagtttcgcttcgcgataatccacttgctcacttgccaatcgat
cccgttccggatttgccaaacaaaactatggacagtttaaacgaggaaatcccgagtgca
cagcttgagggtaccgcgactaacatcagctcttggaaagcattgatttttattcattct
tttgttgatggtactttagaaattgtgtgtcttattattggtgtgttagcatccatggtt
tgtggggccgcatatcccgtacaagcagtggtgtatgccagatttttgaatatctttaca
gagttgaattcgccggattacttccataaaattagcatttttggtgtttactggttgatc
cttgccattgcagaatttttcggttattctataagtgagtattctatgtcttatgtgctg
cagtctgttttacaacgtattcgctggcatctcttccgtaccctccttcgtcaagatgtc
gaattctttgaccgtactgagaatactgtaggtgctttgactacttcactctcaacttcc
attcagaacctagaaggactgacaggatctactcttgggacatttgtgcagattctaaca
aacgtagtctctgtttcaattctttcactggccaccggatggaagctggctttggttaca
ttagctacttcccctgttataattacggctggttattatcgggttgctgcattggatcaa
attcaggataaattgtcaacctcttacaaaacgtctgctgcatatgcttgtgaatctaca
tcagccattagaacagttgccagtcttacgagagaatcgaaggtatatgaaaattactgt
gcatcgttggtccaacctggtagagaaacagccatatcttctttaatatctggtttgttc
ttttctgcgtcgcaagcggttacatttttggtcaatgcgctggcgttttggtacggtgct
acattgatgaaaacaggcgaatatactttagtccaattttatacctgctttattgctatt
gttttcggtatccagcaagctggacaatttttgggctatgcagctgatgttacgaaagct
aaatcgagcgctggatcgattaagtatttgtgtgatagtagaccaaaaattgatacctgg
tctgaaggaggacgaaaaattgaatctttggaagattcttccattgtgtttaatgatgta
aaatttcggtaccctacgagaaagcacatccaggtactccgtggtctcaatttgacggtt
acacctggtcaatttgttgcttttgtgggtgcttcaggatgcggtaagtcaacgacgatt
ggcttaattgaacgcttttatgactgtgaaagcggggctgtagaagttggaggtatcgat
atccgtgactacaacattaatgattaccgtaagcagatagctcttgtatcgcaagagcca
accttgtaccagggtactattcgagagaatatagtccttggtgcttcgagagatgtcacg
gatgaaaacatttatgaatgctgtaagatggcaaatattcatgactttattatggggttg
cctaatggatatgaaacactttcaggacagaaagggtcttctttgtctggtgggcagaaa
caaagaattgctattgctcgtgccttgattcgaaatcctaaaattttactgctagacgag
gcaaccagcgctttggacagtcatagtgaaaaggtagtacaagaagctttgaacaaagcg
tctgagggacgtactacagtagccattgctcatcgcttatcatctatacagcatgctgat
tgtatctttgtatttgatggaggtgtaattgctgaggctggtacacacaatgaacttgtg
aacaagcgtggccgttattatgaacttgtggttgaacaaggtcttggtacggattag
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integrated database retrieval system
