Schizosaccharomyces osmophilus (fission yeast): SOMG_03598
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Entry
SOMG_03598 CDS
T09274
Symbol
atg13
Name
(RefSeq) autophagy associated protein Atg13
KO
K08331
autophagy-related protein 13
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04136
Autophagy - other
som04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
som00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SOMG_03598 (atg13)
04136 Autophagy - other
SOMG_03598 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_03598 (atg13)
03029 Mitochondrial biogenesis [BR:
som03029
]
SOMG_03598 (atg13)
Membrane trafficking [BR:
som04131
]
Autophagy
Autophagosome formation proteins
ULK complex
SOMG_03598 (atg13)
Atg1 complex
SOMG_03598 (atg13)
Mitochondrial biogenesis [BR:
som03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
SOMG_03598 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
80877076
NCBI-ProteinID:
XP_056037832
UniProt:
A0AAE9WC95
LinkDB
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Position
2:complement(join(2416825..2418882,2419156..2419251,2419319..2419453))
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AA seq
762 aa
AA seq
DB search
MPRPTTHLPPMYSAPDGNIGASPIETSRDNSSVGGKSAKIGQVIHHCFYKTGLVILESRL
NIAGSSSSREGTKKNKWFNLEVNETDVYADQFKLWKSIDMTADRKIPPMVLHTYLDMSDL
SRNQKLSIFDGKQHHVIDLNRTNASKIVLERWVISLDGGSSSTSVEMAVLYKKLVVLFRS
LYTYTHIMPLWKLKSRINRLRAHNASLKVGCALSTDNLLHEDFIPINAVLSPTLGNSIAA
YSFSPVNTPMGNFRISVQYRKDCHFQFHNPDAMLSNQLLSADLPSIESHFDRNQSTTDGG
NQYLHPHSSSLVRRQSKSNDPNLLLESEIQQLASVESITAHAAPLVSIHPFKSPSLSASP
GSNLDTMSISPKVAVNRYIHRGPSCSSLNRVSVISESLNKSRPKMPILPSSGSTGLSGND
FHNHPMLRRFSSSFVPKERRGSTSSRARLQLAANQPIRSVQKHDSYETSSADRSGQVADE
TEYAPRDDLSGFIQLLDNHAQHLQHYGESKSESSSLGKPGDPILNESPRLGPRKISESSN
ELFGFESFTPNPNTAVTDDKASAPKEDLTNSNHHIVHDHTLGALCSRLSFSEKPADSVSL
SPLSPAYMPQGTTEGSAPASLPISFDKSEKNLVAPATYPILEQRETSRSTSSSVPPRFEY
QTSLSKSLDHSLTSTSYQPTKTPAPSFVLESNLSHQYPNQHYDSMPENHQTVAPSTPAFE
YLNEHNANYDDDLLFAMTDMALETHPTTTLRIGSKDNEGIMK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcccagacctacgacgcaccttcccccaatgtattcggctcctgacggaaatattggg
gcctctccgattgaaacttctagagacaattcctctgtagggggaaaaagtgccaagatc
gggcaagtgattcaccattgcttttacaagacaggactagtgatattagagtcacgactc
aatatagctgggagcagctcctctcgagaaggaactaaaaagaataaatggtttaatttg
gaagttaatgaaacagatgtgtatgctgaccagtttaaattatggaagtcaattgatatg
actgccgaccgaaagatccctccgatggtattacatacgtatttggacatgtcggatttg
tctagaaatcaaaaactgtctatatttgatggaaagcaacatcatgtcatcgatttaaac
cgtactaatgcttcaaaaatcgtccttgaacgttgggtaatatcattggatggcgggagc
tcttccacttccgttgaaatggccgtattatacaaaaaattagttgtccttttccgttct
ttatacacctatactcacattatgcctttatggaagctaaaaagtcgcatcaatagactt
cgagctcacaatgcttctttaaaggtcggatgcgctctttcaacggataatttacttcac
gaagattttattcctattaatgcagtcctctctcccacgttaggaaacagcattgctgca
tattcattcagccctgtaaacactcctatgggaaattttcgtatttcggtacaatatcga
aaagattgccattttcaattccataatcctgatgctatgttatccaatcaacttctttct
gctgatctgcccagtattgaatctcattttgataggaatcaatcgactacagatggtgga
aatcaatacttacatcctcactcatcttcgttagttcgacggcaatcgaaatcgaatgat
ccgaatttgcttttggaatctgagatacaacagctcgctagtgttgagtcaataactgct
catgctgctcctcttgtttctatacatccttttaaatccccttcactttctgcttctccg
ggatccaatttggatacaatgtccatatctccaaaagttgctgttaatcgatatattcat
cgtgggccttcttgctcttcattaaatagggtttccgttatttcagaaagtttaaataaa
tcgcggccgaaaatgcccattcttcctagttctggtagtaccggtttaagtggcaacgat
tttcacaatcacccgatgcttcgacgattcagcagtagttttgtaccaaaggaacgaaga
ggaagtactagttcaagagctcgattacagttggcggctaaccagcccattcgtagtgtt
caaaaacacgacagttatgaaaccagtagtgcagatcgaagtggccaagtcgctgatgag
actgaatatgcaccacgagatgatttaagtggattcatacagctattagataatcatgct
caacatttacaacactatggtgaaagcaagtcagaatcttcttctttgggaaagccgggg
gatccgattttgaatgaatctcctcgtttaggaccacgtaaaatatctgaaagtagtaac
gagttgttcggttttgagtcttttactccaaatccaaatactgcagttacagacgataaa
gcgtcagctccaaaggaagatttgactaactcgaatcatcatatagtgcatgaccatact
ttaggtgcattgtgctcgagactttctttctctgagaaacccgctgattctgttagtttg
tcccccttgtctcctgcatacatgccacaagggactaccgaaggtagcgctccagcctca
cttccaatttcgtttgataagagtgagaaaaatttggtagctcctgctacttatcccata
ctggaacaacgagagacaagtaggagtacttcttcttcggtgccgccacgtttcgaatat
cagacaagtttgtcaaaatctctggaccattctttgacgtctacaagctatcaacctacg
aagactcccgcaccttcgtttgtgctcgagtcaaatctttctcaccagtatccaaaccaa
cattatgattccatgcctgagaatcatcaaactgttgctccttcaacccctgcttttgaa
tatttaaatgaacataatgcaaattatgatgacgacctactctttgcgatgaccgatatg
gctttagaaactcaccctacaactaccttacgaatcggatcgaaggataatgaaggaata
atgaagtga
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