Schizosaccharomyces osmophilus (fission yeast): SOMG_03658
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Entry
SOMG_03658 CDS
T09274
Symbol
vps11
Name
(RefSeq) HOPs/CORVET complex ubiquitin protein ligase E3 subunit Vps11
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04138
Autophagy - yeast
som04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SOMG_03658 (vps11)
04148 Efferocytosis
SOMG_03658 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_03658 (vps11)
Membrane trafficking [BR:
som04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SOMG_03658 (vps11)
Hops complex
SOMG_03658 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_PEP5_VPS11
PEP5_VPS11_N
VPS11_N
Clathrin
zf-C3H2C3
Beta-prop_NUP159_NUP214
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-rbx1
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
80877136
NCBI-ProteinID:
XP_056037338
UniProt:
A0AAE9WBE8
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Position
2:complement(2553526..2556243)
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AA seq
905 aa
AA seq
DB search
MTTFIRSWKRVTLFQKHELPQKLGRTNVSIASFGNQILACNTSGRVTLYDSSLGVKQVID
LEHEVAIQQILWIDNDRFLLFYNFGEQDGPSFLVIYAFSCSQEDPSLEKKFSLVSANRFI
VDEQPHPIVAVSESLSDRYLACGFGGHVLAFYGTPFRERGLRISNNFKLSEPITSLAFHK
SEDLILYVSTTNKTYSIKGKNITTLDTLGTSINCSSGYNEQNISSLTTTSPSFICSRSDG
LTFYFPSQDKVCFTFPGEKHFLATQGPILALHYSPTDPSATGLPNSRKSMPSSNSFSRLE
GDRLTTPLSRLLLIDLPRKLIVWEGFLRDHSAQILSIDEGFLILTSVNSFLKLKRIDLND
EISLLSKKTMYDLAISLSRQKNMDSYFLQSLMIEYARFLFRKGDYSLSMDWYIKSIRSVN
IPVVCLEFLKAERLDQLIRFIEALMQNDLANSDLKLLLLSCHVETKNLKGINRLIDTGGF
AFNQAFDICHRSGFLEEAKHLGIRFNNHERVIDVLLEEKKYSENLDYMYEIAPSRLLPLL
LRFGRVLLSNLPKETTDLFISFYSNNHKSKQSMRSKAQTKYEKSLRQTYLSLLPYANATP
FGISSMSADHNSETTEERADSEEPQVDESYIAPNPQTCFHIFLNHNSELIRFLEAILPHV
SEEYKTHINTCLFEAYIRESHSSQDENAQGFWKKKANLLLKDSEKHLDLNATFLISQILE
FDDGVRFVQGKSGQTLDIFRSFCKHDDVSRAMEMVRAQGEDQSELYIMMLNYFASTNQLE
PWSKEVKEVTEYIINHQLISPTQLAEILGKSDAVTLGMIEEAVENAAYRFESQISEKKKG
IEIGKSEILELNKELSNLRTTAFVVQESKCSACNTDLELPMVHFRCRHSYHLRCIEDECI
RCQWL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgactactttcattcgatcttggaaacgagtgactctgtttcaaaaacatgaattgcct
caaaaacttggtagaacaaacgtctctatagcatcttttggaaatcaaattctagcttgt
aacacttcggggagggtaaccctatacgattcttccttgggggtaaagcaagtgatcgat
ctggagcatgaagtagctatccaacaaatactttggatcgataatgatcgttttctatta
ttttacaactttggtgagcaggatggtccgagctttttagtcatttacgctttttcgtgc
tctcaagaggatccttcattagaaaagaagttttcacttgtatctgccaaccggtttata
gttgatgaacaaccgcatccaatagtggcggtctctgaatcactatcagatagatattta
gcttgtgggtttggaggacatgtcctagcattttatggtactccttttcgtgaaagagga
ctccgtatttctaataatttcaaattatctgaaccgataaccagcttagcgtttcacaaa
tccgaggacttaattctttacgtttccacaacgaacaaaacttactcaattaaaggaaag
aatataacaactctggatacacttggcacatccattaattgttcgtcaggatataatgag
caaaatatttcctctcttacgactacttcgccttcgtttatctgctctcggtctgatggt
cttacattctattttccctcgcaggacaaagtttgttttacattccctggagagaaacat
tttttggcaacacaaggtcctatattagctttacattattcaccaaccgatccgtctgca
accggcttgcctaattcgagaaagagcatgccatcttctaactctttttcaagacttgaa
ggagaccgtctgacaacaccactttctcgattactattgatagatttaccaaggaaattg
attgtttgggaaggttttttgagggatcattctgcccaaatattatccatagacgaaggc
ttcttaatactaacctcagtcaattcttttttaaaacttaaaagaattgaccttaatgat
gaaatttccctgcttagtaaaaaaacaatgtatgacttggctatttccctctctcgacag
aaaaacatggattcatactttctgcaaagcctaatgatagaatacgctcgctttttattt
cgtaagggagattactcattatctatggattggtatataaaatcaataaggtcagttaat
ataccagtcgtttgcttagaatttcttaaagcagagcgccttgaccaactcataagattt
atagaagcactcatgcaaaacgatttggcaaattctgatcttaaattacttctgctttcg
tgccatgtggaaacaaaaaacttgaaggggattaatagacttatcgatactggtggattc
gcatttaatcaggcatttgatatctgtcatcggtctggttttcttgaagaagctaagcac
cttggtattcggttcaataatcatgagcgagtcatcgatgttcttttagaagaaaagaag
tattccgaaaatttggattacatgtatgaaatcgcgccgtctaggttactcccgttattg
cttcgttttggccgagtattgctttcgaatttaccaaaagagacaactgatctgtttata
tcattttattctaataatcataaatctaagcaaagcatgcgatctaaagctcagacaaaa
tatgaaaagtcattgcgacagacttacctttctcttcttccttatgctaatgctactcca
tttggcatatcttctatgtctgccgatcataattcggaaacgactgaggaaagagcagat
agtgaagaaccccaagtagacgaatcatacattgctccgaacccacagacgtgttttcac
attttcttaaaccataactctgagttgatacgatttttagaagccattttgccacatgtt
tctgaagaatacaaaacacacatcaatacttgcctttttgaagcctatataagagaatcc
cattcttcacaggatgaaaatgctcaaggattctggaaaaaaaaggccaacttactactg
aaagattcagaaaaacacttggatctgaatgctaccttcctgatatctcagattctggaa
ttcgatgacggggtcagatttgtacagggaaagtctggtcaaacactagatatttttcga
tcattttgcaaacatgacgatgttagtcgtgcaatggaaatggtacgtgctcaaggggaa
gatcaaagtgagttatatatcatgatgcttaactatttcgcctcaacaaatcagctagag
ccttggtcaaaagaagtaaaggaggttacagaatatataattaatcatcaattgatttca
cctactcagcttgcagagatcttaggtaaatcagatgccgttactctgggcatgattgag
gaagcagtagagaacgcggcctataggtttgaaagccaaatctctgaaaaaaagaaaggc
atcgaaataggcaaatccgagatcttggaattaaataaagaactgtccaatttacgcaca
actgcttttgttgttcaggagtctaaatgctctgcctgtaatactgatttggaattaccg
atggtacattttcgatgtaggcattcctaccatttacgatgtatagaagatgaatgtata
cgctgtcaatggttgtga
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