Schizosaccharomyces osmophilus (fission yeast): SOMG_03662
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Entry
SOMG_03662 CDS
T09274
Symbol
rrp3
Name
(RefSeq) ATP-dependent RNA helicase Rrp3
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_03662 (rrp3)
03029 Mitochondrial biogenesis [BR:
som03029
]
SOMG_03662 (rrp3)
Enzymes [BR:
som01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SOMG_03662 (rrp3)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
90S particles
Helicases
SOMG_03662 (rrp3)
Mitochondrial biogenesis [BR:
som03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
SOMG_03662 (rrp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
80877140
NCBI-ProteinID:
XP_056037688
UniProt:
A0AAF0AWV9
LinkDB
All DBs
Position
2:join(2561896..2562066,2562117..2563361)
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AA seq
471 aa
AA seq
DB search
MTTDVKKQKKTVNGDGVKDEGFKEEAERKVSSDSKSSLEEKDEKDEKDESPKTFRDLGVI
EELCQACEKLGYKDPTPIQREAIPTALSKRDVIGLAQTGSGKTAAFALPVIQELWDNPSP
YYAVVLAPTRELAYQISEQFEALGGAIGVRSVVIVGGMDMVTQAVALSKKPHILVCTPGR
LMDHLENTKGFSLRNLQYLIMDEADRLLDMDFGPIIDRVLKVIPKERRTMLFSATMTNKV
EKLQRASLHNPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYLVNELAGNTILIFART
VNDTQRLAILLRSLGFSAIPLHGQLSQSNRLGALNKFKSGTRSIMVATDVAARGLDIPLV
DVVVNYDIPTDSKAYVHRVGRTARAGRAGKSVALVTQYDLEPFLRIEAAIGKKMQEYEHQ
KDAVFLLSERVDEAQREAVIQMKEIHERRRSKGKLRTKRKHDDLDREEQVS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacgtgaagaagcaaaagaaaaccgtgaatggagacggtgtcaaagacgaa
ggttttaaggaagaagctgaaagaaaggtgtcttctgattcgaaatcatctttagaggaa
aaagatgaaaaagatgaaaaggatgaatctcctaaaacttttagagacttgggtgttatt
gaagaattgtgtcaggcttgtgagaagttaggctacaaggatcctactcccattcaacgt
gaggctattcccaccgctttgtcgaagcgagatgtgattggtcttgctcaaacaggaagt
ggtaaaactgccgcatttgctctccctgtgatccaggaattgtgggacaatcctagtcct
tattatgctgttgtgcttgcacctactcgagagcttgcttaccaaatttctgaacagttt
gaagcactgggaggtgccattggtgtgcgaagcgttgttattgtaggtggaatggacatg
gtcactcaagcagttgctttgtccaaaaaaccacatatccttgtttgtactcctggtcgt
ttgatggaccatttagaaaataccaaaggatttagtctgcgaaacttacaatacctaatt
atggatgaagctgatcgtcttttggatatggattttggacccatcattgacagagttcta
aaggtcattcctaaagagagacgtactatgcttttctcggccaccatgaccaacaaggtt
gagaagcttcaacgtgcttcccttcataaccccgttcgtgttgccgtttcttccaaattt
tccactgtagataccttgatccagcgttacttgtttttcccttttaaacacaaagatact
tatctcgtttatttggttaatgaacttgctggtaataccatccttatctttgcacgtaca
gtaaacgatactcaacgattggcaattttgttgcggtctcttggatttagcgcaatacct
cttcacggtcaactgagtcaaagcaatcgtcttggtgcattaaataaattcaagtccggt
actagatcaattatggttgctacagatgttgctgctcgtggtttggatattcctcttgtt
gatgtcgttgtcaattacgatattcccactgactctaaagcatacgttcatcgtgttggc
cgtactgctcgtgccggacgtgccggtaaatcagtcgccctcgtaactcaatatgatttg
gagccattccttcgtattgaggctgctattggcaaaaagatgcaagagtacgagcaccaa
aaggatgcagtgttcttgttgtcggagcgggtggatgaagcacagcgagaagctgtgatt
caaatgaaggaaattcatgaaaggaggagatctaagggtaagcttcgtacaaaacgcaag
catgatgatcttgatcgtgaagagcaagtctcttaa
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