Schizosaccharomyces osmophilus (fission yeast): SOMG_03703
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Entry
SOMG_03703 CDS
T09274
Symbol
ssr2
Name
(RefSeq) SWI/SNF and RSC complex subunit Ssr2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SOMG_03703 (ssr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_03703 (ssr2)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_03703 (ssr2)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
SOMG_03703 (ssr2)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
SOMG_03703 (ssr2)
PBAF complex
SOMG_03703 (ssr2)
GBAF(ncBAF) complex
SOMG_03703 (ssr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Zn_ribbon_2
EHMT1-2_CRR
ZZ
Motif
Other DBs
NCBI-GeneID:
80877181
NCBI-ProteinID:
XP_056037998
UniProt:
A0AAE9WCQ2
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All DBs
Position
2:complement(2648492..2650021)
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AA seq
509 aa
AA seq
DB search
MSLETVPAPFIVEQMHPIIVPSYAGWFDMSKIHDIERKSNPEFFNGKSPLKSPSVYKEYR
DFMINTYRLEPTEYLTVTACRRNLVGDVCAIIRVHAFLEQWGLINYQVDPETRPPFRLPP
VSGHVQAINNTPILTQEILSQHAPIKNENETPTPKFLKVEEREYDPKEEKLKVKDDTPEK
DPPSSLLPHKTCYSCGVDCSQAWYHNLKNKEYTICPHCYHQGRFASSYTSSDFLFMEGVT
FAHDRDAPWTEQETLLLLEGIEEYDDDWNQISLHVGTRTKEQCLVHFLQLPIEDPYKKVQ
QDDYGPFQQGFLPFRETENPVLSTLTFLASIIQQQTNSNPSAKFPTEKHSESPEKKDKKM
DSPSSNALETAARAAINAAAEKSRIISSCERRHLRRLVFLLIQSQLEKVEIKMKVLEELE
KFCSLELSELDVRAKKLILERLSTKRMLLEFDSQLKGALNLGGEEGLRILDDMMNTEHTE
VSLTFELPETGMISPLSAENFEKYHAISL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtccttagaaaccgtcccagctccgtttatcgtggagcaaatgcatcccattattgtg
ccttcgtatgcagggtggtttgatatgtctaaaattcatgatattgaacgaaagtcgaac
ccagagttttttaatggaaaatctcctctaaagtccccaagtgtttacaaagaatataga
gattttatgatcaacacttatcgcttggaacccactgaatacctaactgttactgcttgt
cgccgaaacttagttggtgacgtatgtgccattattcgtgtgcatgcatttttagagcaa
tggggtctcattaattaccaggtggatccagagacaagacccccctttcgacttcctcca
gtctctggtcatgtgcaagcgatcaacaacactcccatcctgacccaggaaatactttct
caacatgcaccgatcaaaaacgaaaacgaaacccctacacccaagttcttaaaagtggaa
gaacgcgaatatgacccaaaagaagaaaaactcaaagtaaaagatgatactccggagaag
gatccaccatcctctttgcttcctcacaagacctgctactcttgcggtgttgattgctcg
caagcatggtaccataatctcaaaaataaagaatataccatctgtcctcattgctaccac
caaggccgtttcgcaagctcttatacttcttctgactttttgtttatggaaggcgttacg
tttgctcatgatcgagatgccccgtggactgagcaggaaaccctattattactagaagga
attgaagaatacgatgatgattggaatcaaatttctctccatgtcggtacacgtacaaaa
gaacaatgtctagtgcatttcttacaattaccaattgaagacccttataagaaggttcaa
caggatgattatggcccttttcagcaaggatttctacctttcagagaaactgagaatccc
gtgttgagtaccttgacattcttagcctctatcatccaacagcaaaccaattcaaatccc
tctgcaaaattcccaactgagaagcattctgaaagtcctgaaaagaaagataagaaaatg
gattcaccttcatcaaatgctctagagactgccgcacgtgccgcgataaatgctgcagct
gagaaatcaaggataatatcctcttgtgaacgcagacatttacgtcgtctagtttttctt
cttattcaatctcagcttgaaaaagttgaaataaaaatgaaggttttagaagaactggaa
aaattctgttctttggagctttctgaattagacgtccgtgccaagaaactcatccttgag
cgcctttcaaccaagaggatgctcttagaattcgactcacaattaaaaggtgctcttaat
cttggcggagaagaaggtttgaggattttagacgatatgatgaataccgaacatacagaa
gtgtcgcttacctttgaattgccagagaccggaatgatttctccactaagtgctgaaaat
tttgaaaagtatcatgccatttctttgtag
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