Schizosaccharomyces osmophilus (fission yeast): SOMG_03739
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Entry
SOMG_03739 CDS
T09274
Symbol
tpr1
Name
(RefSeq) RNA polymerase II associated Paf1 complex subunit Tpr1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_03739 (tpr1)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
SOMG_03739 (tpr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_12
TPR_6
TPR_14
TPR_16
TPR_11
TPR_7
ARM_TT21_N
TPR_10
ANAPC3
TPR_CcmH_CycH
TPR_Slam
AimR
Motif
Other DBs
NCBI-GeneID:
80877217
NCBI-ProteinID:
XP_056038645
UniProt:
A0AAF0AX39
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All DBs
Position
2:complement(join(2735458..2738775,2738861..2738881))
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AA seq
1112 aa
AA seq
DB search
MNLRRLPYAICCFEETTVQGQPLLEEEIPFNVALASLKRIKRFKRASNAMEGFTIDAHAS
RIIEVPLLGQEDQTVEIDCASLPEDASELVEILTNEQAGKDLWTKFAREYHIRSLSNQAL
FILTSALNVLKDADSQCLLNANICSVYMHLVRHANWKKDNVARDQHLQNVRTYLEAANRL
NPKLEANVLLHGIYRILLNPLDKDSLENSLRCFDFVLQRSEGNAFALIGKARILYSRGNF
RGALKLYQRALVSSPQIQPDPRIGIGLCFWNLNMKEDAFGAWTRAKDLDQQNHFVNTYLG
LYYYDLAFENVNSDRFLQYYGEALKYTQAAFKAMPSDPVASCILANYVYSKRSLDGCIKL
ANTVVQNSFSPSLVADGYFWMGRAYHQMQNYEKAMTCYQRARSVEDRHLLSFLGIGQIQI
LQNDLTSAKLTFERISEQHPKCAEALIILGCLYASESKSDFTKPRMLLDRAFNLIGSSKI
PRVVDSDLYTTQARLWEKEDTRKSLSFLQRAHGFLKNAQITVHPELLNNIGVLNYHLGNF
QEAKDYFSAARKENLDIGPEILLVLDFNLARCEEELGNNEVSIEIYTKLLDLQPSFADAR
VRLCLLQLANPQEETFKSIRQLMTTDADNLEVRAFFGWYLSKQKRRPAEDPEVRHCSQTL
RHWHDDIYSLVQLGNAYMRQAREIRVQNDKDRSKHQKLYIKAVQSYDQAIKFDPKNAHAA
QGIAVTFAQSRQFSKALLILGKIRESIKDVTTLINIGNCLAELKQFSRATEIFETVISIA
GEDDVYGILNCLGRVWLQRGREEKRTDFLKESLKYSRMALEKNQENTSLQFNVAFVQFQL
SELIYTQPENARTVEDLQFAIQELDDSVKTFSSLVTCKHPPYPPTDIEQRVKMATNTTRK
RLERALQQQSEYQATVTAKLDEAKLNREKEKARRIAEEDALRKAREERERELDEERKRMQ
EEVLQWRKDQEKQIEEELSVASDPEDKSSGRKRKGERRKRKSSSKADKDADVVNEDDTDD
DEIPLSDARNKLSKKRRKNKRVISEDYAFDESDNEQQPADSTEGQGENLFPSSPVNEPAN
GNYKSENELNNKNEGGLDNLFSDEENEPSPSS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcgacgtttgccctacgcaatttgctgtttcgaagagacgactgtgcaagga
caacctttgctggaagaagaaattccattcaacgttgcgttagcttctttgaaaaggatc
aaacgttttaaaagagcttcaaatgcaatggaggggtttactatagatgcacatgcctct
cgaattattgaagtgcctttattaggtcaagaagatcagactgtagaaattgactgtgca
agtttgccagaagatgcctctgaactagtagaaatattaacaaatgaacaagctggaaag
gacttgtggacaaaatttgctcgtgaataccatatacgtagtctttccaaccaagcattg
ttcattctaacttctgcgttgaacgttttgaaggatgctgacagtcaatgtctattaaac
gcgaatatctgctctgtttatatgcatttggtgagacatgcgaattggaagaaggataat
gttgctcgtgaccaacatttgcagaatgtgcggacatatctggaagctgccaatcgtttg
aaccccaaattagaggcaaatgttttgcttcatggaatttatcgaattctgttgaacccc
cttgataaagattccctagaaaattctcttcgctgttttgattttgtattgcaaaggtcc
gaaggcaatgcctttgcattaattggaaaagctcgtattttatattcccgaggaaatttt
cgaggagccctgaagctctaccaacgtgctcttgtcagcagtccacaaattcaacccgat
ccccggattggcattggtctttgtttttggaatttgaatatgaaggaggatgccttcggt
gcttggactcgagcaaaagacctagatcaacaaaaccattttgtaaatacttacttgggc
ctatactactacgatcttgcttttgagaacgtcaactctgatcgtttcttacaatattat
ggcgaagctttaaaatatacccaagctgcctttaaagctatgccaagcgaccctgtcgct
tcttgcattctagctaattatgtttattcaaaacgtagtctcgatggttgcattaaactt
gcaaacaccgtcgtacaaaattctttctctccttctcttgtggcagatggttatttttgg
atgggtagagcttatcatcaaatgcaaaattatgaaaaagcgatgacatgttaccaaaga
gcccgttccgtcgaggatcgtcatctcttatccttcttaggaataggccagattcaaatt
cttcaaaatgatttgaccagtgccaaattgacttttgaacgtatttctgaacaacatccc
aaatgtgcagaggcacttatcattttgggatgtctctatgcctcagagtcaaaatccgat
tttacgaaacctcggatgcttttagatcgtgcatttaacttaatcggatcatcaaagata
cctagagttgttgattctgatttgtatactactcaagctagactatgggaaaaagaggat
acaaggaaaagtttgagctttttgcaacgcgcccacggcttcttaaaaaatgctcaaatt
actgttcatcctgaactacttaacaatatcggagttttaaactaccatcttggaaacttc
caggaagccaaagattatttctcagcggctagaaaggaaaatctcgatatcggtcctgaa
attttacttgtgcttgatttcaaccttgcccgttgcgaagaagaacttggcaataatgaa
gtatccattgaaatatatactaagcttttagatctccagccgtcttttgcagatgctcgt
gtgcgcctttgcttgttgcaattagctaatcctcaggaggaaacttttaagtccattcga
cagctaatgacaaccgatgcagacaatttggaagtacgagcgttctttggctggtatctg
agtaaacaaaagcgtcgccctgcggaggatcccgaggttcgccattgttcacaaactctg
cgacattggcacgatgatatatattctcttgttcagcttggtaatgcctatatgcgtcaa
gctcgagaaattcgtgtccagaacgataaagaccgtagtaagcatcaaaagctttacatc
aaagccgtccagtcttatgatcaagctatcaaatttgaccccaaaaacgctcatgctgct
caaggaattgccgttacatttgctcaaagtaggcaattttctaaagctttgctcatccta
ggaaaaattcgtgaatctataaaagatgttactactttaattaatatcggtaattgctta
gccgaattgaagcagtttagccgggcaacggagatttttgaaactgttatttccatagca
ggtgaagatgatgtatacggaattttaaattgccttggccgagtttggttgcaacgaggt
cgtgaagaaaaacggactgatttcttaaaagagtcattgaagtactcaagaatggcttta
gaaaagaaccaagaaaatacgagcctgcaattcaacgtagcattcgttcaatttcaactc
tctgaactgatatacactcagcctgaaaacgcacgaaccgtggaagatttacaatttgct
attcaggaattggacgactctgtgaagacgttcagttcattggtgacatgcaaacaccct
ccttatccacccacagatatcgaacagcgtgtaaagatggctacgaacaccaccagaaag
agactggagcgtgcactacaacaacaatctgagtatcaagctactgttactgccaagctc
gatgaagctaagctcaatcgtgaaaaagaaaaagccagaagaatagctgaagaagacgct
ttgcgcaaagcccgagaggaacgcgaacgtgagcttgatgaagaacggaaacgcatgcaa
gaggaggtattacagtggagaaaggatcaagagaaacaaatcgaggaagagcttagtgtt
gcctccgatcccgaagataaatcttctggaagaaagagaaaaggcgaaagaaggaaacgt
aaatccagctctaaagctgataaagacgccgatgttgtcaatgaagatgatactgatgat
gatgaaattcctctatcagatgccagaaacaaattatctaaaaaacgtcgtaaaaacaaa
cgtgtaatatcagaagattacgcctttgacgagtctgacaatgagcagcaacctgcggat
tctacggaaggtcaaggtgagaatctatttccatcttctcctgtgaatgaacccgctaac
ggcaattacaaaagcgaaaatgaattaaataataaaaatgaaggaggacttgataatctt
ttctccgacgaagaaaatgagccttccccttcttcgtaa
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