Schizosaccharomyces osmophilus (fission yeast): SOMG_03754
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Entry
SOMG_03754 CDS
T09274
Name
(RefSeq) HECT-type ubiquitin-protein ligase E3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SOMG_03754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
som04121
]
SOMG_03754
Enzymes [BR:
som01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
SOMG_03754
Ubiquitin system [BR:
som04121
]
Ubiquitin ligases (E3)
HECT type E3
SOMG_03754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
UNC45-central
Tim54
Motif
Other DBs
NCBI-GeneID:
80877232
NCBI-ProteinID:
XP_056038519
UniProt:
A0AAE9WDC3
LinkDB
All DBs
Position
2:complement(2767942..2772900)
Genome browser
AA seq
1652 aa
AA seq
DB search
MVAKLDFTQADLHPVSKPASNPYSFTNSSDLTKKHYLSELENTLRKTKIRISSDVEKMSV
SILPSQSIHMQDSVSSGLNYRNRIDSGRLGNCPYPKSHNRLQNSSPSRLPYGKKKPGYQQ
SQGLPDPSKICLEDFALKSSSTGPSSLMLSNPSENKLSEVHLTNTTNSSNTSNGQGKSSG
IESGSNRDSSRITRDFDQSESNYHEGSGAPYENSNEDDYDFDENSDASTNENNNDDDNYD
DQESNDDNGDEGHDDSDEDEEDDEDKDEEEEEEEEEEEEEKDEDEDDYSFRNVAFRSPNN
IFRRRSGTNFPDETGDNIDEQSLYSELSRLQRSDRFRRLASSVLSSGNLENAEDDDLGAS
AFSFNPLRSSVFAPSGQFSRLLRGIKDFSDPTIQLLSLQELSETFAMSTEDMLIGVFSPD
AFISAFSDILSSELLVGETAIQLMLTCATCISNMMEALPLSMAKVAHSPIVRVLCERMFD
MQYIDIAEQALGIFEKLSVDFGNCILEHRGMLAALQYFDFFYTNVQRTAISLAANCCKHI
DEFNAEFAEEVIPLLSNTLQSSDSVVVTKGFECLESIIDSLNFSPNIIKSLISEDLISTV
IKALTTSTMQKKATDLQVQLFHIISSLCITSSSFILPVLNHGLPEIMYELLCGLPPPETS
HHSSMVAMQSLYHCPNSLIIALLQTIISFLPKAPFAGQADLVTRIHRMDSILLPIVLDIY
STVPTHEVKLLAVSTALMMLRSIDGEDLRRLVQNLPLSSFIASILCARKADNYSKQNALE
MAIYLLEALPDVYYSLFIREGVVQEVGYISRSINSDLKKLKLSISFSQSKSTHRHEELKK
LSSIKALSKSFLGNYEIESLENPVLHDLIDLSKRLASDVYVESSCKELAVVFQKTTNVTS
FELLHSGLIRSLLLSMRKPNSNALRYFLLSMNKSKETEVLEYEGSPLMSFIFCLQELLSR
IENFQLTILPSLSYNSLEHVSSRQFKVRLIALPGSNIQPPFRSLIVSINGLATIRVLENY
LYTRVLHRDESERRLSSFPESDSLQESGDSTRHESFENPTDLSQNENSSIGSGSVNEADS
SVPGELNSRHFAFCLGKKLLLPETTIFKALFSFIERSDEHTIDDIWKTTIPLYYGEPSSY
KEDNETQNSVDESEEIPSKIKEILEMLRVLYYGVRDLQTIFPEKHIRGSLENVLMEFSNW
KLSAKLNRQLEEQSIIVHGCTPSWCISLTSEYPFLIPFESRYQLLQSTSLGLPRSVAFIL
SRNSNLPKNEGSSILQYVSLRRQKIRIPRKDMFNYALQVLSSYGSSDKVLEIEYEDEVGS
GLGPTLEFYTTVSREFTNTAFDIWRNEHSESQYVFHASGLFPSPISTVEGSDENKKKLSL
FSALGKFVARSIYDSRVVSLQCNPLFFARAIPLTISSVAKVDKGLATSLRYLQSLTSGVG
GPNFDVDIESLGLDFTLPGYSSIELIPNGSTISVNKSNLEDYIKYIIDFTVGKGIRRQIQ
SFQEGFSSVFAYSSLRVLTEYELSSLFGTIDEDWSYETLLKSVVADHGYTIESAPIQRLL
QLMSSMNFREQRDFLQFITGSRKLPIGGFAGMNPPFTIVRRLNEPPYKPDDYLPTVMTCV
NYLKLPEYSSVEVLASRLSKAILEGQGSFHLS
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaaagcttgactttacccaagccgaccttcatcctgttagcaaacctgcgtcc
aacccttattctttcacaaactcgagtgacttaaccaaaaagcattatttaagtgaatta
gagaatactttaagaaagacaaagattaggatatcaagtgatgtcgaaaaaatgagtgtc
tccatattgccttcacaatcaatccatatgcaagattccgtgtcctctggattgaattac
agaaacagaattgactctggtaggttaggaaactgcccttatcctaagtcacataatcga
ctgcagaattcaagtccttcgagactaccatacgggaagaaaaagcctggatatcaacag
tctcaaggtttgccagatccgtcgaaaatctgtctggaagactttgctttgaagagttct
tcaacaggcccctcatcattaatgcttagcaatcccagtgaaaataaattatcggaggtt
catttgacgaatacgacgaatagctctaatacttctaatggacaagggaaatctagtgga
atcgaatccggaagcaacagggattcatccaggataactcgcgactttgaccagagtgaa
agtaactatcatgaaggaagtggagccccatatgaaaatagcaatgaagatgattatgat
tttgatgaaaacagcgatgctagcactaatgaaaataataatgatgatgacaattatgat
gaccaagaaagcaatgacgataatggtgatgaggggcacgatgatagcgacgaagatgag
gaggacgatgaagacaaagacgaggaagaagaagaagaagaagaagaagaagaagaagaa
aaggatgaggatgaggatgactacagcttcagaaacgtcgcctttcggagtccaaataac
atatttcgtcgtcgctccggaacaaatttccctgacgaaaccggagacaacattgatgag
cagtctctttatagtgaacttagccggcttcaaagaagtgatcgttttcgccgcttagcc
tcaagtgtcctttcatctggtaatttggaaaatgcagaggacgatgaccttggtgctagc
gcattttcctttaatccgcttcgttcttctgtctttgctccttctggtcaattttcgcgt
ctgttgaggggaattaaagattttagcgatccgaccattcagttactttctctccaagaa
ctttccgagacttttgcaatgagcacagaagatatgttaataggagtcttttccccagat
gcgttcatctctgccttttcagatatcctttcttctgaactcttagttggagaaactgca
atccaacttatgcttacttgtgccacttgcatatccaacatgatggaagcccttccactt
tctatggccaaagttgcccatagtcccatcgtccgcgtcctatgcgaaaggatgtttgac
atgcaatacatagatatagctgagcaagctttggggattttcgaaaagttgtctgttgac
tttggtaattgtatactagaacaccgtggtatgctagctgctctgcaatactttgatttt
ttttatacgaacgtccagagaacggctatttcgcttgctgctaattgctgtaagcatatt
gacgagtttaatgccgagtttgctgaggaagttatccctttgttatccaatactttacag
tcttctgattcggttgttgtaacgaagggttttgagtgtttggaaagtattatcgattca
ttgaatttctctccgaatataatcaaatcactcataagcgaagatttaattagcactgtc
ataaaagctttgaccacgagcactatgcaaaagaaggccactgatcttcaagttcaactt
tttcacataatttcatcattatgtataacctctagttcttttatactacctgttttaaat
catggacttccagaaattatgtatgaattattgtgcgggcttccacctccagagacctcg
catcattctagtatggtagctatgcagagtctctatcactgtcctaacagtctcattatc
gctttattgcaaactataatatcatttttacctaaagccccttttgccggacaagcagac
ttggtaacacgaattcatcgaatggatagtatattactaccaattgtacttgacatctac
tccaccgtccctacacacgaagtgaagttattagcagtatctacagcacttatgatgtta
aggtcaattgatggtgaagatctaaggcgtctagtacaaaatttgcctttatcatccttc
attgcatctattttatgtgctagaaaggcggacaattattcaaaacaaaacgctttggaa
atggcgatttacctccttgaagccctacctgatgtttactattccctgtttataagagaa
ggtgtcgtgcaagaagttggatacataagccgttccataaattctgatttaaagaagcta
aagctcagtatttcattctcccaatccaagtctactcatcgtcatgaagaactaaagaaa
ctgtcatccattaaggcgttatccaaaagtttcttaggaaattacgagattgaaagcctg
gagaatccagtgcttcacgatttaattgatctttcgaagcgcttagctagtgacgtttac
gttgaaagctcttgtaaagaacttgcagtagtttttcaaaaaacgaccaacgtcactagt
tttgaattgttacactcaggattaatacgtagtttgcttttgtccatgcggaaacctaat
agtaacgcattaaggtactttttgttgtcaatgaataaaagcaaagaaacggaggtttta
gaatatgaaggaagcccgcttatgtcgttcatattttgtttacaggagcttttgtcgaga
attgagaattttcaattaacaattttaccttctctttcatataattcgttggaacacgtt
tcgtccaggcaatttaaagttcgattaattgctcttcccggatccaacatccaaccccct
ttccgttcattgattgtatcaataaatgggttagccacgattcgagtattggaaaactat
ctatatactcgagtccttcatcgggatgaaagtgagcgtcgactgtcatcatttcctgaa
agtgactcattgcaggagtcaggcgactcaaccaggcatgaatcttttgaaaatccaacg
gatttatctcagaatgaaaacagttccattggttcaggttctgtaaatgaagctgattct
tctgtacccggtgaactcaattctagacattttgcattttgtcttggtaaaaagctttta
ctgccagaaaccactatttttaaagcattatttagttttattgaacggtcagatgaacac
actattgatgatatatggaaaacaacaattcccctatattatggcgaaccctcttcttat
aaggaagacaatgagactcagaattctgtagacgaatcggaagaaattcctagcaaaata
aaagaaatactagaaatgttacgtgtactatattatggtgttcgtgatttacagaccata
tttcccgaaaagcatattcggggaagtcttgaaaacgtactcatggaatttagtaactgg
aagttgagtgctaagttaaaccgtcaattggaagaacagtctataattgtgcatggatgt
acaccttcgtggtgtatttctttaacttctgaatatccatttttaataccgtttgaatca
cgctatcaactactgcagtcaacatcgcttggtttaccaaggtcagtggcttttatatta
tcaagaaattccaatttgcccaagaatgaaggctcttctattcttcagtacgtaagttta
cgtcgtcagaaaattagaataccaagaaaagatatgtttaattatgctttgcaggttcta
tctagctatggatcttctgataaggtattggaaatagaatatgaagacgaagttggttct
ggcctaggcccgacattggaattttacactactgtttctagagagtttacgaacactgcc
ttcgacatctggagaaatgagcatagtgaatcacaatatgtttttcatgcttctggttta
ttcccttcacccatatcgacggtggaaggaagcgatgaaaataaaaaaaaactatcgcta
ttttcggcattaggaaaattcgttgcacgttcaatttatgactcaagagtcgttagtttg
caatgtaatccgctgttctttgcaagggctattccgcttactatctcgtcagttgcaaag
gtagataaaggtctagcgacttcattgcgttacttgcaatccctaacttctggggttggg
ggccctaattttgacgttgatatagagagcttaggccttgattttacgcttccagggtat
tcctctatagagcttatacccaacggaagtactatttcggtcaacaaaagtaatttggaa
gactacatcaagtacatcattgattttactgttgggaaagggattagacgacaaatacaa
agcttccaagaagggttttcaagcgtttttgcttactcttcacttcgagttttaacggag
tatgagctttcatcgctttttggaacaattgatgaagactggagttatgaaacgcttctt
aaatcggttgttgcagatcacggatacactatcgaaagtgcacctattcaaaggctttta
caacttatgagtagtatgaacttccgggaacagagagatttccttcaatttataactggt
agtcgaaagttaccgataggtggttttgctggtatgaacccaccatttacaattgtgaga
cgtttgaatgaaccaccatataaacccgacgattatttaccaactgttatgacttgcgtt
aattatttgaaattacctgaatactcttctgtggaagttttggctagtcgtctatcaaag
gccatcttagagggtcaaggtagctttcatttgtcataa
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