Schizosaccharomyces osmophilus (fission yeast): SOMG_03864
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Entry
SOMG_03864 CDS
T09274
Symbol
trm401
Name
(RefSeq) tRNA (cytosine-5-)-methyltransferase
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
som03016
]
SOMG_03864 (trm401)
Enzymes [BR:
som01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
SOMG_03864 (trm401)
Transfer RNA biogenesis [BR:
som03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
SOMG_03864 (trm401)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
Motif
Other DBs
NCBI-GeneID:
80877340
NCBI-ProteinID:
XP_056037499
UniProt:
A0AAE9WBI8
LinkDB
All DBs
Position
2:complement(join(3019851..3019920,3019968..3021782,3021835..3021957,3022010..3022050,3022105..3022137))
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AA seq
693 aa
AA seq
DB search
MGRRQYSGKKKKNDEFIDWTQVPRRNERLEKYYKLQALVSDDEFESLMQKLAEPLPTTFR
ISSCNQHATQVRDHFIKHYYPLIENVEVEGTKISPPVLLPWYPNQMAFMLDIPKTIIRKS
PPLKLLQQFLVLETEAGDISRQEAVSMIPPLFLHVKSHHKVLDMCAAPGSKTAQLLEELH
TPADGKETFESLLPSGIVVANDADNKRAHMLIHQIKRLNSPNVLIVNHDASFLPHFHVEV
DGPNGKEKSFLKFDRILADVPCSGDGTFRKNISLWSDWTLKTALGLHSTQIKILKRGIDL
LANSGRLVYSTCSMNPIENEAVVAAVLKASKGSVRLIDVSDEIPELKRSPGVKSWTVCDS
DLNTYSSFESVPKDLNGKMAKSLWPLPEEELTQMGIERCMRVYPHHQNTGGFFVAVIEKC
DNSEVSLKKDIPEQENSDEAGKKAEVEQPLLKKQKSSKFEKRLVSAEHRALKAGNKYHEL
DPFVYIKENDELLDNIYESFKMNDNHLKKDLFFVRNLEGTISRAVYVSNSLFKNIIESNR
NRVKFVHGGLKIFVKQDFGSLSKEVAKDTNVCVFRVQSDGSRLASHCISRDCVLTTNLSD
LMIFLDHVAVSMDNFPEDSIFRKHFEKLPLGNTLLYVDLKKEHSFIKKDVYIPLWKSVRM
CNVMISNAEKRTLKLQIEGPRIEDQTASTEKST
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtaggcagtattctggtaaaaaaaagaaaaatgatgagtttatagattggact
caagtaccacgaaggaatgaaagacttgaaaagtattataagcttcaagcgctcgtgtca
gatgatgaatttgaaagtttgatgcaaaaacttgctgaacctttgccgactacgtttcgt
atttcctcttgtaaccaacatgccactcaagtccgggatcacttcataaagcattactat
cctctaattgagaacgtggaagttgaaggtacaaagatttcacccccagttttgctacca
tggtatcctaatcagatggctttcatgctggatatcccaaagactattattcgaaaaagt
cctcccttaaagcttcttcagcaattcttagttttagagaccgaggccggtgatatcagc
agacaagaagctgtaagtatgattcctcctcttttccttcatgtgaaaagccatcataaa
gttcttgacatgtgtgctgctcctggctctaaaactgcccagcttctagaggagcttcat
acacctgcggatggcaaagaaacattcgaaagtctgcttccttctggtatagtggttgca
aatgacgctgataacaaacgagctcacatgcttattcaccaaatcaagagattgaactct
ccaaatgtattaatcgtcaatcatgatgcatctttcctgcctcatttccatgttgaagta
gatggccccaacggaaaagaaaaatctttcttaaaatttgaccgcattttggctgatgtt
ccatgttctggcgatggcacatttcgcaaaaacatctccctttggagtgattggacacta
aagactgctcttggtctacattctacccaaataaagattttgaaacgtggtatcgatcta
ctggctaattctggtcgtcttgtctattctacttgctcgatgaatccaattgaaaatgaa
gctgtcgttgctgccgttttaaaagcaagcaaaggttcggttagattaatagatgtaagt
gatgaaatacccgagttgaaaagaagccctggtgtaaagagctggaccgtgtgtgacagt
gacttgaacacttattcttcattcgaatccgttcctaaagatttaaatggaaaaatggcc
aaatctctctggccattacccgaagaagaactcacgcaaatgggaattgaaagatgcatg
agagtgtaccctcatcatcaaaacactggtggctttttcgtagccgtaatagaaaagtgt
gacaactcagaggtttcattaaagaaagacattccggagcaagagaattcggacgaagca
ggtaaaaaagcagaagttgagcaacctttgctaaagaagcaaaaatcttccaaatttgaa
aaaagattagtgtccgcagaacatcgagctttaaaagctggaaataaataccatgaacta
gaccctttcgtttatattaaagaaaatgacgaactgctggataatatctacgagtcgttc
aaaatgaatgataaccatctgaaaaaagatctattttttgttcgaaatcttgagggaaca
atatctcgtgctgtatacgtctctaacagtttgttcaaaaatataattgagagtaatcga
aaccgagtgaaatttgtacatgggggcctaaagatttttgtgaaacaagattttggaagc
ttatctaaggaagttgccaaggataccaatgtttgtgttttccgtgttcaaagtgatgga
tctagacttgcaagtcattgtatcagcagagactgtgttttgaccaccaatctctcagat
ttgatgattttcttagaccatgtagctgtttcgatggataacttcccagaggacagtatt
ttcagaaagcattttgaaaagcttcctttaggtaatacccttctttacgttgatctaaaa
aaagagcatagctttatcaaaaaagacgtctatattcctctctggaaaagtgttcgcatg
tgcaatgtcatgatttcgaatgctgaaaaaaggacattaaaattacagattgagggaccc
agaatcgaagatcaaactgcatcgactgagaaaagtacttaa
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