Schizosaccharomyces osmophilus (fission yeast): SOMG_03914
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Entry
SOMG_03914 CDS
T09274
Symbol
top3
Name
(RefSeq) DNA topoisomerase III
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03440
Homologous recombination
som03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SOMG_03914 (top3)
03460 Fanconi anemia pathway
SOMG_03914 (top3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
som03032
]
SOMG_03914 (top3)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_03914 (top3)
Enzymes [BR:
som01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SOMG_03914 (top3)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Topoisomerases
SOMG_03914 (top3)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
SOMG_03914 (top3)
FA (Fanconi anemia) pathway
SOMG_03914 (top3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
80877390
NCBI-ProteinID:
XP_056038558
UniProt:
A0AAF0AXR1
LinkDB
All DBs
Position
2:complement(join(3123756..3123794,3123872..3124604,3124655..3124791,3124842..3125334,3125388..3125566,3125616..3125813,3125858..3125938))
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AA seq
619 aa
AA seq
DB search
MRVLCVAEKNSIAKSVANILGGGQVKRRDTKSKYIKNYDFTFDFGGYIGTAQVTMTSVSG
HLTEASFPSEYNSWSSVPQDILFDARIITSVSKNANVLADNIKKEARNATYLYIWTDCDR
EGEHIGMEITNVARISNPQIRVIRADFNNLERKHIIQASKRPRELSKDAADAVSARIELD
FRLGAIFTRLQTLQLQRAFEILQSKVISYGPCQFPTLGFVVDRWQRVEDFVPENFWSLKL
VDKRERQTVNFTWKRNRVYDRLAAILFLEHCLDAKVAKVVKVNQKPTRRYKPLPLSTVEL
TKMGPKFLRISSKKTLELAESLYTNGFVSYPRTETDQFDSGMDLHGIIGKLTPSEDWGTF
AQGLLDGNFRIPRKGKHNDRAHPPIHPISFVHRSALQSQDHWRVYELITRRFLACCSENA
IGAETIIELQMGDELFSQKGLIILERNYLDVYPYDKWTGTGQLPAYQVGEEIMPNMLNII
DSVTTSPSYLTEPELIALMDVNGIGTDATMADHIEKVQEREYVVKRKKRGAATEFVPSSL
GIALAKGYDEIGLEWSLTKPFLRKEMEVQLKNIETGHLDRDALVQMTLSQFRDVFHLTKQ
RFDCLKNSCRLYLIELNEG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttctatgtgtcgctgaaaaaaactcaatagctaaaagcgtagcaaacattttg
ggtggaggacaagtgaaacggagagacacgaaaagcaagtacataaaaaactatgatttt
acgtttgactttggagggtatattggtacggcgcaagttacaatgacttccgtttcagga
catctgacagaagcttcctttccttccgagtataacagttggagttctgtacctcaggac
attctcttcgatgcgcgaattataacctcagtttccaaaaatgctaatgttcttgctgat
aacataaaaaaagaagcgaggaacgcaacgtatttgtatatttggactgactgtgatcga
gaaggagaacatataggaatggaaattacaaacgttgcaagaatcagtaatccgcaaatt
cgtgtcattcgagcagactttaacaatttggaaagaaaacacatcattcaggcctcaaag
cgaccaagagagctatccaaagatgcagcggatgcagtttcagcaaggattgagcttgat
tttcgtctaggtgctatttttacgcgtttacaaacattacaattgcagcgtgcttttgaa
attcttcagagcaaagttattagctatggaccatgtcaatttcctacattagggttcgtt
gtcgatagatggcaaagagtggaagattttgttcctgaaaacttttggtccttgaagtta
gttgacaaacgagaacggcaaaccgtaaactttacatggaagagaaatcgtgtttatgat
agattggccgctattttgtttttagaacattgcttggacgcaaaagttgctaaagttgtc
aaagtgaatcaaaagcccactcgacgatataaaccgctccccctatcaaccgtcgaactc
acaaaaatgggacctaaatttcttcgtatttcttctaaaaaaactcttgagttggccgag
agcctttatacaaatggatttgtctcgtatccacgtacggaaactgatcaatttgactcc
ggcatggacttacatggaattatcggcaaactaacgcctagcgaagactgggggactttt
gctcaaggacttttagatggaaattttcggattcctagaaagggaaaacataatgatcga
gcacatcctcccattcatccgatcagttttgttcatcgttctgccttacagagccaagac
cattggagagtttacgaactcatcaccagaaggtttttagcatgctgctctgaaaatgct
attggagcagagacgattatcgagcttcagatgggtgatgaactcttttctcaaaaaggc
ttaattattttagagcggaattacctagatgtttatccttatgacaaatggactggaact
ggacagcttcctgcttaccaggtcggagaggaaataatgcctaacatgctcaacattatt
gatagcgttacaacatcaccttcgtatttaaccgaaccagagctcattgcactaatggat
gtaaacggaatcggtacagacgcaactatggctgatcatatcgaaaaagttcaagaacga
gaatatgtagtcaagcggaaaaagcgtggtgcagccacagagtttgtccccagctccctc
gggattgctttagcaaaaggttatgatgaaattgggcttgaatggagtttgaccaaacca
tttttaagaaaagagatggaagtccaactaaagaatattgaaaccggacacttggatcga
gatgcactggtacaaatgacactttctcagttccgggacgttttccatttgaccaagcaa
aggttcgattgtttgaaaaacagttgccgattataccttattgaacttaacgaaggctaa
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