Schizosaccharomyces osmophilus (fission yeast): SOMG_03935
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Entry
SOMG_03935 CDS
T09274
Symbol
tif1
Name
(RefSeq) translation initiation factor eIF4A tif1
KO
K03257
translation initiation factor 4A
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_03935 (tif1)
03012 Translation factors [BR:
som03012
]
SOMG_03935 (tif1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
som04147
]
SOMG_03935 (tif1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SOMG_03935 (tif1)
mRNA cycle factors
Stress granule specific factors
SOMG_03935 (tif1)
Translation factors [BR:
som03012
]
Eukaryotic type
Initiation factors
eIF-4
SOMG_03935 (tif1)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SOMG_03935 (tif1)
Exosomal proteins of bladder cancer cells
SOMG_03935 (tif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
fragilysinNterm
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
80877411
NCBI-ProteinID:
XP_056038644
UniProt:
A0AAF0AW85
LinkDB
All DBs
Position
2:3177639..3178817
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AA seq
392 aa
AA seq
DB search
MAEHLEDQVIETNYDEVIDTFDDMSLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVL
AQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHA
CIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKD
QIYDIFQLLPPSAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVE
KEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQSQRDTL
MHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSIN
FVTSEDVRMMREIEQFYNTHIEEMPMNIADLI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcacctggaggatcaggttattgaaaccaattacgatgaagttatcgatact
ttcgatgacatgagcttgaagccggagcttctccgtggtatctatgcctatggttttgag
cgtccctctgctattcaacagagagccatcatgcccattttgggtgagcgtgatgttctt
gctcaagctcaatccggtactggtaagactgccacgttttccatctctgtcttgcaaaag
attgacactagcttgaagcaatgccaagcccttattcttgctcctactcgtgagcttgct
caacaaattcaaaaggttgttgttgccttgggtgacttgatgaacgttgagtgccatgcc
tgtattggtggtacccttgttcgtgatgatatggccgctttgcaagctggtgttcacgtc
gttgtcggtactcctggtcgtgtccacgacatgatccaacgtcgtgctctccccactgac
gctgttcaaatgttcgtccttgacgaagctgatgaaatgttgtctcgtggtttcaaggat
caaatttatgacatcttccaacttttgcctcctagcgctcaagttgtcttgctctccgct
actatgcctcaagacgttttggaagtcaccaccaagttcatgcgtgaccccattcgtatt
cttgtcaagaaggatgagcttaccttggaaggtattaaacaattctacgtcgcagttgag
aaggaagagtggaagctcgatactctttgcgacctttatgaaactgtcacagttactcaa
gctgtcattttctgcaacacccgtagaaaggtcgactggcttactgagcaacttactgag
cgtgacttcactgtctcctctatgcacggtgatatggaccaatctcaacgtgacactttg
atgcacgaattccgtactggttcttcccgtattctcatcaccactgacttgcttgctcgt
ggtattgatgtccaacaagtttctttggtcattaactatgatctccccgctaaccgtgaa
aactacattcaccgtattggtcgtggtggtcgtttcggacgtaagggtgtttctattaac
tttgttactagcgaagatgttcgtatgatgcgtgaaattgagcaattctacaacacccac
attgaagagatgcccatgaacattgctgatttgatctaa
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