Schizosaccharomyces osmophilus (fission yeast): SOMG_03946
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Entry
SOMG_03946 CDS
T09274
Symbol
prw1
Name
(RefSeq) Clr6 histone deacetylase complex subunit Prw1
KO
K10752
histone-binding protein RBBP4
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03082
ATP-dependent chromatin remodeling
som03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SOMG_03946 (prw1)
03083 Polycomb repressive complex
SOMG_03946 (prw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_03946 (prw1)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
SOMG_03946 (prw1)
Histone modification proteins
HAT complexes
HATB complex
SOMG_03946 (prw1)
HDAC complexes
Sin3A-HDAC complex
SOMG_03946 (prw1)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
SOMG_03946 (prw1)
PRC2.2
SOMG_03946 (prw1)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
SOMG_03946 (prw1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
SOMG_03946 (prw1)
Chromatin remodeling factors
NuRD complex
SOMG_03946 (prw1)
NuRF complex
SOMG_03946 (prw1)
NuRF complex (fruit fly)
SOMG_03946 (prw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
CAF1C_H4-bd
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
DUF5113
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
80877422
NCBI-ProteinID:
XP_056038209
UniProt:
A0AAF0AVV0
LinkDB
All DBs
Position
2:complement(join(3201405..3202497,3202559..3202664,3202739..3202823))
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AA seq
427 aa
AA seq
DB search
MAVSAIAQSAKQVQASEEAINQEKCINEEYKIWKKNSPFLYDLIITRALEWPCVSLQWYP
DQQIFPELGYTEQNVLLGVRADAGKYYLAVAGIQLPYLNQNTNPTTIEKDEQDSSLRVNV
RELYSHPESISQAKIMPQATSHVATIGNNHNDVLVFNESSFGSYNSSDEFPIQPAMKLQK
HDLSCTSLCWNYMKQGQLVSGSRDSTICHWDIDHYNESNPSSALKAQISTHEKPVNDIKY
HFKHGDIFASVSSDQHLHLHDSRRADYSTTPLKSIHAHSAEVNALAFNPLNDFIMATCSA
DKTIGLWDLRNLNNRLYTLEGHEDHVSNIKFSPHEESVLVSTSVDRRTLLWDLSRIGEEQ
SAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTLATAAEDNILQLWTPSRSIWGNQHL
EEDAQAA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaagtgctattgctcagtcagccaagcaagtgcaagcttcagaagaagcaatt
aatcaagaaaaatgtattaatgaagaatataaaatttggaaaaaaaattctccttttttg
tatgatttgattattacaagggctttggaatggccatgtgtgtctcttcagtggtatcca
gatcaacaaatattccccgaacttggatatacggaacaaaacgtcctgctgggtgtccgt
gctgacgctggaaagtattatctcgcagttgctggtattcaattaccttacctaaatcaa
aatacaaatcctactactatagaaaaagatgaacaagacagctctcttcgagttaatgtt
cgtgagctctattctcatccagagtcaattagccaagcgaaaataatgccacaggcgact
agccatgttgctactatcgggaataatcataatgatgttttggtgtttaacgaatcgtct
tttggttcctataactcttcagacgaatttccaatccaacctgccatgaaactacaaaag
catgacttatcttgtacatctttatgctggaattatatgaagcaggggcaactcgtgtca
ggctctcgagattccactatctgccattgggatattgatcattacaatgaaagtaatcct
tcctctgcattaaaggctcaaatatctacacatgaaaagcccgttaatgatattaaatac
catttcaaacatggtgatatttttgcttccgtttctagtgatcaacatcttcaccttcat
gacagcagacgagcagattattcaacaacccctctgaaaagcattcatgctcattctgca
gaggtgaatgcacttgccttcaatcctctaaatgattttattatggctacatgctcagcg
gacaaaaccattggcctttgggatctccggaatctcaacaaccgcttgtacacccttgaa
ggacacgaggatcatgtttctaatataaagttttctcctcatgaggagtccgtattggtt
tctacttctgttgatagaagaactttactttgggatctctcacggattggtgaggagcag
tccgccgaagaagcccaggatggcccacccgagttgctattcatgcatggtggtcatacc
tcgtgtaccattgatatggactggtgtcctaattacaactggactttggctactgctgct
gaagacaatattctccagctctggacaccttcccgttcaatttgggggaatcaacatttg
gaagaagatgctcaagccgcttga
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