Schizosaccharomyces osmophilus (fission yeast): SOMG_03949
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Entry
SOMG_03949 CDS
T09274
Symbol
srs1
Name
(RefSeq) cytoplasmic serine-tRNA ligase Srs1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOMG_03949 (srs1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
som01007
]
SOMG_03949 (srs1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
som03016
]
SOMG_03949 (srs1)
Enzymes [BR:
som01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SOMG_03949 (srs1)
Amino acid related enzymes [BR:
som01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SOMG_03949 (srs1)
Transfer RNA biogenesis [BR:
som03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOMG_03949 (srs1)
Prokaryotic type
SOMG_03949 (srs1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Med30
GED
Motif
Other DBs
NCBI-GeneID:
80877425
NCBI-ProteinID:
XP_056038199
UniProt:
A0AAE9WEU3
LinkDB
All DBs
Position
2:complement(3208415..3209767)
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AA seq
450 aa
AA seq
DB search
MLDINLFQTEKGGNPELIRESQRKRGADVGVVDRVIEMYKEWVALRFELDNTNKSMNRAQ
KEIGMKMKAKEDASELLAEKNALTERKKNLIEQETAKNKEMLTVVQSIGNIVHDSVPISM
DEDNNEVIRTWAPAGVTAEKRDCLSHHEVLTRLDGYDPERGVKVAGHRGYFLRQYGVFLN
LALIQFGLDFLYQRDYTALQAPTMLNKDVMARTAQLEQFDEELYKVVDGDEERYLVATSE
QPISAYHSNEWFEKPAEQLPIKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQFVLTE
PEKSWEAFDDMMNHAEEFYKALEIPFRVVSIVSGALNNAAAKKFDLEAWFPYQGEYKELV
SCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERAICCIIENYQTPDGINVP
KALQPYMGGKTFLPFTKELPKNSTSKKGKN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgttggacattaacttgtttcaaacggaaaagggaggaaacccagagttgatccgtgaa
tctcaaagaaagcgcggtgctgatgttggcgtggttgaccgtgttattgaaatgtacaag
gaatgggttgctcttcgttttgagctcgataataccaacaagtcgatgaatcgtgctcag
aaggaaattggtatgaagatgaaggcaaaggaagatgcctctgagcttttggctgaaaag
aatgccttgactgaaagaaaaaagaacttgattgaacaagaaaccgccaagaataaagaa
atgctcactgttgttcaatctattggtaacattgttcatgattcggtccctattagcatg
gacgaagacaacaacgaagtgattcgcacttgggcccctgctggtgttactgctgaaaag
agagattgcctttctcatcacgaagtattaactcgtttggacggttacgatcctgagcgt
ggtgtgaaggttgctggccacagaggctacttcctccgtcagtatggtgtctttctaaac
ttggccttgatccagtttggtttggactttttgtatcaacgcgactacactgccttacag
gctcctaccatgttgaacaaagacgtaatggccagaactgcccaactggaacagtttgac
gaagaattgtacaaggtagttgatggtgatgaggaacgctacttggttgctacctctgag
caacccatctctgcttaccacagcaatgaatggtttgaaaagcctgctgagcaacttccc
atcaagtatgctggctatagcacttgctatcgccgtgaggctggatctcacggacgtgat
gcctggggtattttccgtgtccacgcttttgagaagattgagcaatttgttttaactgag
cctgaaaaatcttgggaagcctttgatgatatgatgaatcatgctgaagagttttacaaa
gctttggaaattcctttccgtgtggtctccattgtctctggtgctttgaacaatgctgct
gctaagaaatttgatttggaagcttggttcccttaccaaggagagtacaaggagcttgtt
tcttgctccaactgcaccgattatcaatcccgtaatttggaaatccgttgcggtgtgaaa
aagatgggtgatcgtgagaagaagtacgttcactgcttgaactccactctttgcgctact
gagcgtgctatttgctgcatcattgaaaactatcaaactcctgatggtattaatgttccc
aaggctcttcaaccttatatgggtggaaagaccttcttgcctttcaccaaggagcttcct
aagaactctacttccaaaaagggaaagaactaa
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