Schizosaccharomyces osmophilus (fission yeast): SOMG_03956
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Entry
SOMG_03956 CDS
T09274
Symbol
prp19
Name
(RefSeq) Prp19 complex subunit, ubiquitin-protein ligase E4 Prp19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040
Spliceosome
som04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_03956 (prp19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SOMG_03956 (prp19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
som03041
]
SOMG_03956 (prp19)
04121 Ubiquitin system [BR:
som04121
]
SOMG_03956 (prp19)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_03956 (prp19)
Enzymes [BR:
som01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SOMG_03956 (prp19)
Spliceosome [BR:
som03041
]
Complex B
Other components
Prp19 complex
SOMG_03956 (prp19)
Complex C
Prp19-CDC5 complex
SOMG_03956 (prp19)
Ubiquitin system [BR:
som04121
]
Ubiquitin ligases (E3)
U-box type E3
SOMG_03956 (prp19)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
SOMG_03956 (prp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Prp19
Beta-prop_THOC3
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_NUP159_NUP214
Frtz
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
BBS2_Mid
EIF3I
WD40_Gbeta
U-box
Beta-prop_VPS8
Tricorn_2nd
CBM_11
WD40_MABP1-WDR62_2nd
KNTC1_N
zf-Nse
Peptidase_C8
Motif
Other DBs
NCBI-GeneID:
80877432
NCBI-ProteinID:
XP_056038117
UniProt:
A0AAE9WCS3
LinkDB
All DBs
Position
2:join(3222092..3222149,3222193..3222297,3222548..3223854)
Genome browser
AA seq
489 aa
AA seq
DB search
MFCSISGETPKEPVVSRVSGSIYERRLIEQAINETSKDPVTQQECSLDDLVPVKVPDFIK
PRPPSATSLPALLSLFQEEWDALALEQFDLRKKLSETKQELSTSLYSLDAAFRVISRLTK
ERDEAREALAKFSDNVSSMSQPENLDVEMKDGSQDTKASLKSTVDETLKQLSTKRKQTKL
QPTWATPEVLEKLAHSSPLPVLPSAEKDVKTLLIPRPGGTGVSLCLVDSRVSLVDCSSSK
PLKSFDSSITACCWLDISKIALMNSDTKMIEVYDVPSEVESVSEPSFSIPVENENVMFLS
AHSSGEYIVAATDATCTLYSMKESVYSLNISAKITALSFHPDGHIFAVGLENGEIQFFET
ASGVVAAKFGPQDGSIESLQFGENGYWLAAVASNEKGTSIWHLGKSKLAHMVPTDASTTA
AALDITCQLLASSDDKYLYIHSFVKASKSWNLVGKVEASLVSNLAWIEDPHKLVYSTNQG
SVCLLESIN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttcaatcagtggagaaacgccgaaagaaccggttgtttcacgtgttagcgga
agcatttatgaacgacgcttaatagaacaagcaattaatgaaacttccaaggaccctgtc
actcagcaggagtgttcgctcgatgacttggttcctgtaaaagtacccgactttatcaag
cctcgtcctccttctgcgacttctttgccagccttactttctttgttccaagaagaatgg
gatgctttggcactagagcagttcgatttacggaaaaaactgagtgaaacaaagcaagaa
ctttcgacatccctttattcactagatgctgcttttcgagtaatatcacggttgaccaag
gaacgcgatgaagcaagagaagctttggccaagttttccgataacgtctcttctatgtct
cagcctgaaaatcttgatgtagaaatgaaggacggcagccaagacaccaaagcaagccta
aaatctacagtagatgaaactcttaagcaactttccacaaaaagaaagcaaacaaaatta
caacctacttgggcaactccggaggttcttgaaaaacttgcacatagttcaccgcttcct
gttttaccttctgctgaaaaggatgttaaaactctcttaattccacgacctggaggtaca
ggcgtctctctttgcttggttgatagtcgcgtttctctagttgattgttcttccagcaag
cccttaaaatcctttgattcatctataaccgcatgctgctggttggatatttctaaaatt
gctcttatgaactctgatacgaagatgattgaagtttatgatgttccttcagaagttgaa
tcagtttctgaaccttcattttcaattcctgttgaaaatgagaacgtaatgtttttatct
gctcattcaagtggagagtacattgttgcagctacggacgcaacttgtactttatattct
atgaaagaaagtgtctattctctcaatatatcggctaagattactgcactttcttttcac
cccgatggacatatctttgctgttggtttagaaaacggtgaaattcaattcttcgagaca
gctagtggtgttgtagctgcaaaattcggtcctcaagatggttcaattgagtcgctgcaa
ttcggtgaaaatgggtactggctggctgcagttgcttcaaatgaaaagggaacctccatt
tggcatttgggaaaatccaaattagctcacatggtaccaacggatgccagcactactgca
gctgcgttagacataacatgtcaacttttggcatcttctgatgataagtatttgtacatt
cattcatttgttaaagcctccaagtcttggaacctggtgggcaaggtcgaagcttctttg
gtttcaaatttagcttggatagaagatccacacaaactggtctactctacaaatcaaggt
tctgtttgtcttttggaaagtattaattaa
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