Schizosaccharomyces osmophilus (fission yeast): SOMG_04011
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Entry
SOMG_04011 CDS
T09274
Symbol
ubc13
Name
(RefSeq) ubiquitin conjugating enzyme E2 Ubc13
KO
K10580
ubiquitin-conjugating enzyme E2 N [EC:
2.3.2.23
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SOMG_04011 (ubc13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
som04121
]
SOMG_04011 (ubc13)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_04011 (ubc13)
Enzymes [BR:
som01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
SOMG_04011 (ubc13)
Ubiquitin system [BR:
som04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
SOMG_04011 (ubc13)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Rad6 epistasis group
SOMG_04011 (ubc13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
UEV
RWD
Prok-E2_B
Motif
Other DBs
NCBI-GeneID:
80877487
NCBI-ProteinID:
XP_056037717
UniProt:
A0AAF0AX24
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All DBs
Position
2:complement(join(3349566..3349738,3349815..3349899,3350019..3350180,3350228..3350254))
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AA seq
148 aa
AA seq
DB search
MALPKRIIKEIDTLTRDPPPGIEASPMEDNLRYFQITIEGPFQSAYEGGKFHLELFLPEE
YPMMPPSVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPL
DNDVAKIWKDNEQQAIMNAREWTQKYAL
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcctaaacgtataatcaaggaaatcgacactttgacgagagaccctccacca
ggaatagaggcatctcctatggaggataatcttcgctacttccaaattacaattgaagga
ccttttcaatccgcttatgagggtggaaagtttcatttggagttgtttttaccagaagaa
taccccatgatgccccctagcgttcgtttcttgactaaaatttatcaccctaatgttgat
aaacttggtagaatctgcctttccacgctgaaaaaggattggagtcctgctctgcaaatt
cgtacagttttattgtctattcaagccctaatgggagcaccaaatccagacgaccctctg
gataatgatgttgctaaaatctggaaggacaatgagcaacaagccataatgaatgctcgt
gaatggacacaaaagtatgctttgtaa
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