Schizosaccharomyces osmophilus (fission yeast): SOMG_04199
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Entry
SOMG_04199 CDS
T09274
Symbol
ago1
Name
(RefSeq) argonaute
KO
K11593
eukaryotic translation initiation factor 2C
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_04199 (ago1)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_04199 (ago1)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SOMG_04199 (ago1)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SOMG_04199 (ago1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SOMG_04199 (ago1)
microRNA pathway
RISC loading complex
SOMG_04199 (ago1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoL1
ArgoN
ArgoL2
Headcase
Motif
Other DBs
NCBI-GeneID:
80877675
NCBI-ProteinID:
XP_056039454
LinkDB
All DBs
Position
3:join(313988..314125,314447..316825)
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AA seq
838 aa
AA seq
DB search
MDVTPYKPPTDSAVRPGYGKLGRPVNLKANFFKINALPNHKINQYHVIIGDGSRLTRMLV
NKIWNSKELKQQLGSSWRSCVYDGKSLLWTKDDITDFFISVNIGNEKREQLIDFGIQKTT
TINLQTLTEFVNSKYALDPHVLNGIMFLDLLLKKRPSETLYGFMRSFFSGESTFALGNGI
EAWKGFYQTIRPTQGQMSVNVDVSSSAFWRDGSFLSLLLEYTNSKDVQSLTRIDFKTLSR
RFRLLKVTCKHKNNQGTPLSRKVYSIQGFSSNRASATTFTRNNNGKSETISVSKYFHEHH
NVRLQYPDLPCVVVKNGAMLPVELCYVEKGQRYTAKLNADQTAKMIRFAAQRPHERVQQI
QGFIRQSAWDTDPYLAEYGMKIASSMTDVSGRILNTPSICYGGNSIERPTGGSWNLRGKR
FFKPAGAPVKSWAVMCFTSSRKLPTVVIENFVKTYVQALTGLGIQFSQKKPPIMYADARA
NISESVKGLYRKAELVSKCPPDYLFFIVDRNSPEPYGSIKRICNTTLGIPSQCALSHHIQ
AAKPQYCANLGMKINAKLGGINTVLQAKSNPLGTVPTLIIGADVYHPGVGASGVSIASLV
GSLNLEGSKYTAVSRAIPRHQEVIDDMKDVIVHLLQGFKASTGAIPQRIIYFRDGTSEGQ
FKFVIEQELGEIKAAFQKLSLNYNPKVTVCTTQKRHHARFFIKNKQDGDKNGNPLPGTII
EKNVTHPFEYDFYLISHATLQGVTAPVHYTVLHDEIRMPPDQFQALCNNLCYVYARSTTS
VSLVPPVYYAHLVSNLAKFQDPTLDNDTDSVVSEENSEETVKPLAEISGKLKSKMWFM
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggatgttacgccttataaacctcctacggatagcgcagtccgtcctggttatggcaag
ttaggtaggccagtcaatcttaaagccaactttttcaagattaatgccctcccgaaccac
aaaattaatcaatatcatgtgatcataggtgatggctctcggttgactcgtatgttggtc
aacaaaatctggaattcaaaggaattaaaacaacagcttggctcatcttggcgatcttgc
gtttacgatggcaaaagtttactttggacgaaagatgatattactgatttcttcatttca
gtgaacattgggaatgagaagcgtgaacagttgattgacttcggcattcaaaagaccacc
acaatcaatttgcaaacgttgacagaatttgtaaatagcaaatatgctcttgatccacac
gttttgaatggaatcatgtttctagacttgctattgaaaaagcggccttctgagaccttg
tatggattcatgcgttccttctttagtggggaatctacatttgcattaggaaacggtata
gaagcttggaaaggcttttaccaaacaattcgacctacccaaggccaaatgagcgtcaac
gtcgatgtatcttcgagtgcattttggagagacggttcctttctttccttgttgttagaa
tacacaaactccaaagatgttcaaagcttaactcgcattgattttaaaactctttcaaga
agatttcgtttgctgaaagttacctgtaagcataaaaacaatcagggaacgcctttatcc
aggaaagtgtattctatccaaggattttcctccaatcgtgcttctgctacaacatttacc
cgcaataataacggtaagtctgaaaccatttccgtctccaaatatttccatgagcatcac
aatgttcgtttgcagtatcctgacttgccttgtgtcgtcgtcaagaatggcgctatgctg
cccgtggaactttgctacgttgaaaaagggcagagatacacggctaaattaaacgccgat
cagactgcaaagatgatacgtttcgctgcgcaacgtccgcatgaacgtgtgcagcagatt
caaggatttattcgtcaatccgcatgggacacagatccttatttggcagagtatggtatg
aaaatagcatcttccatgacggacgtttcaggtcgtatattgaatacgccttccatttgt
tatggcggtaattcaattgaacgaccaacaggtggcagctggaatttacgtggaaaacga
ttctttaaacctgctggtgcacctgttaagtcatgggcagtcatgtgttttacatcgagt
cgaaaactacctactgtagtcattgaaaatttcgtgaaaacttatgtgcaagccttgact
gggctgggtattcagttctctcagaagaaacctcctattatgtatgccgatgcacgggca
aacatttcagagtctgttaaaggtctgtatcgaaaggctgaacttgttagcaagtgccct
cctgattatttgttttttatcgttgacaggaattctccggaaccatacgggtccataaag
cgcatttgtaacacaacattgggtataccatctcagtgcgccttgagccatcacatccag
gcggcgaaaccacaatattgcgccaatcttggaatgaaaataaatgctaaacttggtgga
ataaatacggtcttacaggctaaatctaatccgcttggaactgttccaactctgattatt
ggtgcagatgtctatcatcctggtgtcggggcatcaggcgtatctatcgcttccttagtg
ggatctctaaaccttgaaggtagtaagtatacagcagtttcacgcgccattcctcgacat
caagaagttattgatgatatgaaggacgtaatagtccatcttctgcaaggatttaaagca
tcgactggggcaataccgcaaagaattatctatttccgtgatggtacgtctgaaggtcag
tttaaatttgttattgagcaagagcttggtgaaattaaagcagctttccagaagctttcg
ctaaattacaacccaaaagtaacggtttgcacaactcaaaagcgacaccacgctcgcttt
tttattaaaaataagcaggatggtgataaaaatggaaatcctctcccaggtacaataatt
gagaaaaatgttactcatccatttgaatacgatttttacttaatttctcacgcaacactc
caaggtgttaccgctcctgtgcattacactgttcttcacgacgaaattcgaatgccccct
gatcagtttcaagcattgtgtaacaatttgtgttatgtgtatgcaagatctactacctct
gtgtctttggttccacctgtatactatgcccatcttgtaagtaatttagcaaagttccaa
gatccgacgttagacaacgatacggatagtgttgtctcggaagaaaattctgaagaaact
gtaaaaccattagctgagatttctggcaaactgaaaagcaaaatgtggtttatgtaa
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