Schizosaccharomyces osmophilus (fission yeast): SOMG_04287
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Entry
SOMG_04287 CDS
T09274
Symbol
bpb1
Name
(RefSeq) KH and CC/hC domain splicing factor Bpb1
KO
K13095
splicing factor 1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_04287 (bpb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
som03041
]
SOMG_04287 (bpb1)
Spliceosome [BR:
som03041
]
Complex A
Other components
Complex A specific factors
SOMG_04287 (bpb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_3
zf-CCHC_4
DUF7351
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
80877763
NCBI-ProteinID:
XP_056039600
UniProt:
A0AAE9WIE1
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Position
3:complement(join(506027..507810,507856..507886))
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AA seq
604 aa
AA seq
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MLKARSGGSTGSNNVPLGRRRFDGGPDSLPPLPNPVNSRSRFDQVDHSESLPRRHENQFP
EDRGRRLYKKHYWGKPTPIDEMLPSQMELELSIGSCMTNEQVELFAMNVRLEEITQKLRT
GSVVPSDRERSPSPPPQYDNHGRRLNTREIRYKKKLEDERHHIIEKAMKTVPNFKAPSDY
RRPAKTQEKVYVPVQDYPEINFIGLLIGPRGHTLKDMESKSGAKIAIRGKGSVKEGKGKS
DPSVRGNMEEDLHCLVTADSEDKISHAIRLIDLVIQTAASTPEGQNDLKRNQLRQLATLN
GTLRDDENQVCQNCGNVGHRRYDCPERINHTLNIVCRHCGNAGHIARDCPVRNQPPVADA
AADREYQSLMQELGGGSIASAADQQHALEYTETANTNSAAPPPWAANNGPPSESSSPAPW
TKATPSIASTPAATPAPWTKATPSIASTPAATPAPAPAPWQQAVPPQPVSSTSTGGLPPW
QQGTQPVISDPNLPGLPLPGMPPGLPPAPAVPGLPTAGAAPDMISTPLMNLPQPPMLPPG
MAAPPGMAPPQAMPSTFPAYAPPPPGMPLPGAPGISNAPPGMPQTLSFGAPPGMPMPPGT
SPKP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaagcgagatctggagggtccacaggatcaaataatgtccctcttggtcgaagg
cggtttgatgggggacccgattctttaccgccattgcctaatcctgtaaactctagaagc
aggtttgatcaagtcgatcattcagagtctctccctcgtcgacatgaaaaccaatttcct
gaagaccgtgggcgtcgtttgtacaaaaaacattactggggcaagccgactcccatcgat
gaaatgctgccctcccaaatggaattagaattaagtattggatcttgtatgaccaatgaa
caagtagaactgtttgctatgaatgttagacttgaagaaatcactcaaaaacttcgcaca
ggaagcgtcgtccccagtgatagagagcgttctccttctcctcctccccagtacgataac
catggtcgtcggctaaatacaagagaaattcgttacaagaaaaagctagaggacgagcgt
catcacatcattgaaaaggctatgaagaccgttcccaatttcaaagctcctagcgattat
cgccgtccagcaaaaacacaagaaaaggtttacgttcctgtacaggattacccagaaatc
aactttatcggtcttttaattggccctcgaggtcatacattgaaagacatggagtcaaaa
tctggagccaaaatcgccatccgtggtaaaggaagtgttaaagaaggaaaaggtaaaagc
gatccatcggtacgtggtaatatggaggaagaccttcactgtcttgtgaccgccgattca
gaagacaaaattagccatgccattcgattaattgatcttgtcattcaaactgccgcttcc
actcccgaaggacaaaatgacttaaagagaaatcagctccgtcagctcgccaccctgaat
ggtacccttcgagatgacgagaaccaagtttgtcagaactgcggtaatgttggccatcgt
cgttatgattgtcctgaacgaattaatcataccctaaatatcgtttgcagacattgcggt
aatgctggccatattgcacgagactgtcctgtgagaaaccaacctcccgtagccgatgct
gcggcagatcgtgagtatcaaagtctcatgcaggaattgggtggtggctctattgcttct
gctgctgatcaacagcatgctttggagtatactgaaactgctaacaccaattccgcggca
ccacccccttgggctgccaataacggcccaccatcagagtcttctagtccagctccttgg
acgaaagccactccgagcattgcttctacccctgctgcaactccagctccttggacgaaa
gccactccgagcattgcttctacccctgctgcaactccagctccagctccagctccttgg
caacaagcggtgccccctcagcctgtctcttctacatcaactggtgggttacctccttgg
caacagggtacccagccggtgatttccgatcctaatctaccgggtcttcccctccccggc
atgcctccaggccttccccctgcacccgctgtgcctggactaccaacagctggcgcagca
ccggatatgatatctacgcctttgatgaatcttccacagcctcctatgcttccgccagga
atggctgccccaccaggtatggctcctcctcaagctatgccttctacttttcctgcttat
gctcctcctcctccaggcatgccgctgccgggtgctccaggaatatccaatgctcctcct
ggaatgcctcaaacgctttcatttggagcgccgcctggtatgcccatgcctccaggcacg
tctcctaaaccttaa
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